RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 DEDD2Q8WXF8 326 aa17.3■□□□□ 0.36
SMPD1-209ENST00000533196 CSTL1Q9H114 145 aa17.3■□□□□ 0.36
SMPD1-209ENST00000533196 MS4A6AQ9H2W1 248 aa17.3■□□□□ 0.36
SMPD1-209ENST00000533196 MPTX1A8MV57 137 aa17.29■□□□□ 0.36
SMPD1-209ENST00000533196 PRSS54Q6PEW0 395 aa17.29■□□□□ 0.36
SMPD1-209ENST00000533196 LILRB2Q8N423 598 aa17.29■□□□□ 0.36
SMPD1-209ENST00000533196 TMEM217Q8N7C4 229 aa17.29■□□□□ 0.36
SMPD1-209ENST00000533196 A0A0J9YWU9 116 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 IGLC1P0CG04 106 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 AKR1C4P17516 323 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 NPY1RP25929 384 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 YPEL3P61236 119 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-209ENST00000533196 RPL11P62913 178 aaKnown RBP17.28■□□□□ 0.36
SMPD1-209ENST00000533196 SUPT4H1P63272 117 aaKnown RBP17.28■□□□□ 0.36
SMPD1-209ENST00000533196 TIGITQ495A1 244 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 LGI3Q8N145 548 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 GATAD1Q8WUU5 269 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 GRAMD2BQ96HH9 432 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 U3KQ87 197 aa17.28■□□□□ 0.36
SMPD1-209ENST00000533196 RND2P52198 227 aa17.27■□□□□ 0.36
SMPD1-209ENST00000533196 ATP5IP56385 69 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-209ENST00000533196 KLF9Q13886 244 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-209ENST00000533196 SMCO1Q147U7 214 aa17.27■□□□□ 0.36
SMPD1-209ENST00000533196 TOMM5Q8N4H5 51 aa17.27■□□□□ 0.36
SMPD1-209ENST00000533196 Q8WTZ3 238 aa17.27■□□□□ 0.36
SMPD1-209ENST00000533196 TRIM63Q969Q1 353 aa17.27■□□□□ 0.36
SMPD1-209ENST00000533196 HSPB7Q9UBY9 170 aa17.27■□□□□ 0.36
SMPD1-209ENST00000533196 IGHV3-66A0A0C4DH42 116 aa17.26■□□□□ 0.35
SMPD1-209ENST00000533196 DUXBA0A1W2PPF3 345 aa17.26■□□□□ 0.35
SMPD1-209ENST00000533196 S100A5P33763 92 aa17.26■□□□□ 0.35
SMPD1-209ENST00000533196 ZNF124Q15973 351 aa17.26■□□□□ 0.35
SMPD1-209ENST00000533196 TMEM170AQ8WVE7 144 aa17.26■□□□□ 0.35
SMPD1-209ENST00000533196 OR10J1P30954 320 aa17.25■□□□□ 0.35
SMPD1-209ENST00000533196 P2RY1P47900 373 aa17.25■□□□□ 0.35
SMPD1-209ENST00000533196 EIF2B2P49770 351 aaKnown RBP17.25■□□□□ 0.35
SMPD1-209ENST00000533196 PYDC2Q56P42 97 aa17.25■□□□□ 0.35
SMPD1-209ENST00000533196 TMEM128Q5BJH2 165 aa17.25■□□□□ 0.35
SMPD1-209ENST00000533196 LYZL2Q7Z4W2 148 aa17.25■□□□□ 0.35
SMPD1-209ENST00000533196 RABAC1Q9UI14 185 aa17.25■□□□□ 0.35
SMPD1-209ENST00000533196 U3KQE9 123 aa17.25■□□□□ 0.35
SMPD1-209ENST00000533196 NUPR2A6NF83 97 aa17.24■□□□□ 0.35
SMPD1-209ENST00000533196 IFNA10P01566 189 aa17.24■□□□□ 0.35
SMPD1-209ENST00000533196 DEFB131AP59861 70 aa17.24■□□□□ 0.35
SMPD1-209ENST00000533196 DTD1Q8TEA8 209 aa17.24■□□□□ 0.35
SMPD1-209ENST00000533196 PRR13Q9NZ81 148 aa17.24■□□□□ 0.35
SMPD1-209ENST00000533196 V9GYH0 126 aa17.24■□□□□ 0.35
SMPD1-209ENST00000533196 ALMS1Q8TCU4 4167 aa17.23■□□□□ 0.35
SMPD1-209ENST00000533196 HELTA6NFD8 242 aa17.23■□□□□ 0.35
SMPD1-209ENST00000533196 CCDC160A6NGH7 325 aa17.23■□□□□ 0.35
SMPD1-209ENST00000533196 K7EQG2 157 aa17.23■□□□□ 0.35
SMPD1-209ENST00000533196 HNRNPCP07910 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMPD1-209ENST00000533196 AP2S1P53680 142 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-209ENST00000533196 SLC25A21Q9BQT8 299 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-209ENST00000533196 HYDINQ4G0P3 5121 aa17.22■□□□□ 0.35
SMPD1-209ENST00000533196 CXorf65A6NEN9 183 aa17.22■□□□□ 0.35
SMPD1-209ENST00000533196 NXPH3O95157 252 aa17.22■□□□□ 0.35
SMPD1-209ENST00000533196 STXBP6Q8NFX7 210 aa17.22■□□□□ 0.35
SMPD1-209ENST00000533196 ZNF701M0R085 212 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-209ENST00000533196 TOMM40O96008 361 aa17.21■□□□□ 0.35
SMPD1-209ENST00000533196 RBMS2Q15434 407 aaKnown RBP17.21■□□□□ 0.35
SMPD1-209ENST00000533196 ZNF79Q15937 498 aa17.21■□□□□ 0.35
SMPD1-209ENST00000533196 LRTM2Q8N967 370 aa17.21■□□□□ 0.35
SMPD1-209ENST00000533196 OR1S1Q8NH92 325 aa17.21■□□□□ 0.35
SMPD1-209ENST00000533196 NPIPB3Q92617 1050 aa17.21■□□□□ 0.35
SMPD1-209ENST00000533196 RARRES2Q99969 163 aa17.21■□□□□ 0.35
SMPD1-209ENST00000533196 RBKSQ9H477 322 aa17.21■□□□□ 0.35
SMPD1-209ENST00000533196 AGRNO00468 2067 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 SLC25A6P12236 298 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 EWSR1Q01844 656 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMPD1-209ENST00000533196 LEMD1Q68G75 181 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 C16orf54Q6UWD8 224 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 TMED4Q7Z7H5 227 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 CCDC190Q86UF4 302 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 STHQ8IWL8 128 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 FAM24BQ8N5W8 94 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 DCANP1Q8TF63 244 aa17.2■□□□□ 0.34
SMPD1-209ENST00000533196 PITX3O75364 302 aa17.19■□□□□ 0.34
SMPD1-209ENST00000533196 IL4P05112 153 aa17.19■□□□□ 0.34
SMPD1-209ENST00000533196 RD3LP0DJH9 198 aa17.19■□□□□ 0.34
SMPD1-209ENST00000533196 GPX4P36969 197 aaPredicted RBP17.19■□□□□ 0.34
SMPD1-209ENST00000533196 PMS2P11Q13670 270 aa17.19■□□□□ 0.34
SMPD1-209ENST00000533196 TMEM41BQ5BJD5 291 aa17.19■□□□□ 0.34
SMPD1-209ENST00000533196 ACY3Q96HD9 319 aa17.19■□□□□ 0.34
SMPD1-209ENST00000533196 RBM38Q9H0Z9 239 aaKnown RBP17.19■□□□□ 0.34
SMPD1-209ENST00000533196 FAM90A26D6RGX4 464 aa17.18■□□□□ 0.34
SMPD1-209ENST00000533196 CA1P00915 261 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-209ENST00000533196 IFNA4P05014 189 aa17.18■□□□□ 0.34
SMPD1-209ENST00000533196 NUP62P37198 522 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-209ENST00000533196 CEMP1Q6PRD7 247 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-209ENST00000533196 GLMPQ8WWB7 406 aa17.18■□□□□ 0.34
SMPD1-209ENST00000533196 C11orf68Q9H3H3 251 aaKnown RBP17.18■□□□□ 0.34
SMPD1-209ENST00000533196 SEPSECSQ9HD40 501 aaKnown RBP17.18■□□□□ 0.34
SMPD1-209ENST00000533196 USF2Q15853 346 aaPredicted RBP17.17■□□□□ 0.34
SMPD1-209ENST00000533196 SPANXN2Q5MJ10 180 aa17.17■□□□□ 0.34
SMPD1-209ENST00000533196 MORN3Q6PF18 240 aaPredicted RBP17.17■□□□□ 0.34
SMPD1-209ENST00000533196 OR11H2Q8NH07 326 aa17.17■□□□□ 0.34
SMPD1-209ENST00000533196 PFDN2Q9UHV9 154 aa17.17■□□□□ 0.34
SMPD1-209ENST00000533196 KLK5Q9Y337 293 aaPredicted RBP17.17■□□□□ 0.34
SMPD1-209ENST00000533196 TMED3Q9Y3Q3 217 aa17.17■□□□□ 0.34
SMPD1-209ENST00000533196 SFT2D2O95562 160 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms