RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SLC25A22Q9H936 323 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 TEP1Q99973 2627 aaKnown RBP14.61□□□□□ -0.07
SMPD1-208ENST00000533123 M0R036 132 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 HMGB3O15347 200 aaKnown RBP14.61□□□□□ -0.07
SMPD1-208ENST00000533123 MPDU1O75352 247 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 AMY1AP04745 511 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 MAS1LP35410 378 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 ATP5IP56385 69 aaPredicted RBP14.61□□□□□ -0.07
SMPD1-208ENST00000533123 FAM209BQ5JX69 171 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 MIC13Q5XKP0 118 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 OR10G4Q8NGN3 311 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 OR10G9Q8NGN4 311 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 OR10G7Q8NGN6 311 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 TCEAL7Q9BRU2 100 aa14.61□□□□□ -0.07
SMPD1-208ENST00000533123 CNIH1O95406 144 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 SRSF12Q8WXF0 261 aaKnown RBP14.6□□□□□ -0.07
SMPD1-208ENST00000533123 VPREB3Q9UKI3 123 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 TEX22C9J3V5 150 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 IGHV3-48P01763 117 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 CD69Q07108 199 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 GAMTQ14353 236 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 HAGHQ16775 308 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 TEPPQ6URK8 271 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 OR51M1Q9H341 326 aa14.6□□□□□ -0.07
SMPD1-208ENST00000533123 IGKV1OR2-108A0A075B7D4 117 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 TRAV1-1A0A0B4J248 108 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 MAP1LC3B2A6NCE7 125 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 OPRK1P41145 380 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 CX3CL1P78423 397 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 MBD3L1Q8WWY6 194 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 HSPB9Q9BQS6 159 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 MAP1LC3BQ9GZQ8 125 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 FNDC4Q9H6D8 234 aaPredicted RBP14.59□□□□□ -0.07
SMPD1-208ENST00000533123 PXMP4Q9Y6I8 212 aa14.59□□□□□ -0.07
SMPD1-208ENST00000533123 YIF1AO95070 293 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 HBE1P02100 147 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 MFAP2P55001 183 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 FXYD3Q14802 87 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 ZNF562Q6V9R5 426 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 FAM24BQ8N5W8 94 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 LINC00469Q8N7U9 141 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 OR2T6Q8NHC8 308 aa14.58□□□□□ -0.07
SMPD1-208ENST00000533123 FAM103A1Q9BTL3 118 aaKnown RBP14.58□□□□□ -0.07
SMPD1-208ENST00000533123 HLA-DRB1P01911 266 aa14.58□□□□□ -0.08
SMPD1-208ENST00000533123 MBP02144 154 aa14.58□□□□□ -0.08
SMPD1-208ENST00000533123 BLCAPP62952 87 aa14.58□□□□□ -0.08
SMPD1-208ENST00000533123 SCGB2A2Q13296 93 aa14.58□□□□□ -0.08
SMPD1-208ENST00000533123 PBDC1Q9BVG4 233 aa14.58□□□□□ -0.08
SMPD1-208ENST00000533123 IGHV7-81A0A0B4J1V7 117 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 RBFOX3A6NFN3 312 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 FNDC10F2Z333 226 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 CLN5O75503 358 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 SUB1P53999 127 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMPD1-208ENST00000533123 NDPQ00604 133 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 RHEBQ15382 184 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 SLC39A9Q9NUM3 307 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 GNG13Q9P2W3 67 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 NIPBLQ6KC79 2804 aaeCLIP14.57□□□□□ -0.08
SMPD1-208ENST00000533123 ACOT6Q3I5F7 207 aaPredicted RBP14.57□□□□□ -0.08
SMPD1-208ENST00000533123 C16orf82Q7Z2V1 217 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 TMEM144Q7Z5S9 345 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 STPG3Q8N7X2 389 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 SLC35B3Q9H1N7 401 aa14.57□□□□□ -0.08
SMPD1-208ENST00000533123 LINC01548A6NM66 108 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 S100PP25815 95 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 RNASEH2CQ8TDP1 164 aaKnown RBP14.56□□□□□ -0.08
SMPD1-208ENST00000533123 RAB24Q969Q5 203 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 MISP3Q96FF7 219 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 ACY3Q96HD9 319 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 ESM1Q9NQ30 184 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 MRPL36Q9P0J6 103 aaKnown RBP14.56□□□□□ -0.08
SMPD1-208ENST00000533123 CTXND1A0A1B0GTU2 59 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 M0QZK8 103 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 AP4M1O00189 453 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 C9orf152Q5JTZ5 239 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 Q6ZS46 218 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 ZNF114Q8NC26 417 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 ARPC1AQ92747 370 aa14.56□□□□□ -0.08
SMPD1-208ENST00000533123 ACTR3CQ9C0K3 210 aaPredicted RBP14.56□□□□□ -0.08
SMPD1-208ENST00000533123 DNAJC9-AS1A6NH13 148 aa14.55□□□□□ -0.08
SMPD1-208ENST00000533123 GPX4P36969 197 aaPredicted RBP14.55□□□□□ -0.08
SMPD1-208ENST00000533123 ICAM4Q14773 271 aa14.55□□□□□ -0.08
SMPD1-208ENST00000533123 MRPL41Q8IXM3 137 aaKnown RBP14.55□□□□□ -0.08
SMPD1-208ENST00000533123 ABHD5Q8WTS1 349 aa14.55□□□□□ -0.08
SMPD1-208ENST00000533123 CACNG8Q8WXS5 425 aa14.55□□□□□ -0.08
SMPD1-208ENST00000533123 YPEL4Q96NS1 127 aa14.55□□□□□ -0.08
SMPD1-208ENST00000533123 TMPRSS5Q9H3S3 457 aa14.55□□□□□ -0.08
SMPD1-208ENST00000533123 DMRT1Q9Y5R6 373 aa14.55□□□□□ -0.08
SMPD1-208ENST00000533123 ZFP92A6NM28 416 aa14.54□□□□□ -0.08
SMPD1-208ENST00000533123 GATA2P23769 480 aaPredicted RBP14.54□□□□□ -0.08
SMPD1-208ENST00000533123 RAB31Q13636 194 aa14.54□□□□□ -0.08
SMPD1-208ENST00000533123 SLC35E1Q96K37 410 aa14.54□□□□□ -0.08
SMPD1-208ENST00000533123 OR10J1P30954 320 aa14.54□□□□□ -0.08
SMPD1-208ENST00000533123 CDC34P49427 236 aaPredicted RBP14.54□□□□□ -0.08
SMPD1-208ENST00000533123 C1QL4Q86Z23 238 aa14.54□□□□□ -0.08
SMPD1-208ENST00000533123 TMEM86BQ8N661 226 aa14.54□□□□□ -0.08
SMPD1-208ENST00000533123 IGHV3-21A0A0B4J1V1 117 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 CYB5BO43169 146 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 EGR2P11161 476 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-208ENST00000533123 PRR20EP86478 221 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms