RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, human

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-210	ENST00000531579	RHPN1-AS1	Q9BWJ2	59 aa		11.23	□□□□□ -0.61
NXF1-210	ENST00000531579	TUBA4B	Q9H853	241 aa		11.23	□□□□□ -0.61
NXF1-210	ENST00000531579	IGHV3OR16-8	A0A075B7F1	116 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579		A0A1W2PS18	150 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	MPTX1	A8MV57	137 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	CHEK1	O14757	476 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	ZNF207	O43670	478 aa	Known RBP	11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	IGKV1-17	P01599	117 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	IL5	P05113	134 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	IGLC1	P0CG04	106 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	IAPP	P10997	89 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	OR10J1	P30954	320 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	DEFA1	P59665	94 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	DEFA3	P59666	94 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	IAH1	Q2TAA2	248 aa	Predicted RBP	11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	OR52B4	Q8NGK2	314 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	OR4D5	Q8NGN0	318 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	ENKUR	Q8TC29	256 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	MAGT1	Q9H0U3	335 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	ZFAND3	Q9H8U3	227 aa		11.22	□□□□□ -0.61
NXF1-210	ENST00000531579	PRKDC	P78527	4128 aa	Known RBP	11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	SCAF4	O95104	1147 aa	Known RBP	11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	CMC4	P56277	68 aa	Predicted RBP	11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	IFITM3	Q01628	133 aa		11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	TIGIT	Q495A1	244 aa		11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	ACY3	Q96HD9	319 aa		11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	NARS2	Q96I59	477 aa	Known RBP	11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	SLC35E1	Q96K37	410 aa		11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	SMIM8	Q96KF7	97 aa		11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	METTL26	Q96S19	204 aa		11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	TMEM231	Q9H6L2	316 aa		11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	STRAP	Q9Y3F4	350 aa	Known RBP	11.21	□□□□□ -0.61
NXF1-210	ENST00000531579	TG	P01266	2768 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	OR11H12	B2RN74	326 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	FABP1	P07148	127 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	CD7	P09564	240 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	RD3L	P0DJH9	198 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	TAS2R30	P59541	319 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	POLR2G	P62487	172 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	PAFAH1B2	P68402	229 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	GAMT	Q14353	236 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	SPANXN5	Q5MJ07	72 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	C11orf87	Q6NUJ2	197 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	RAB40C	Q96S21	281 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	RNF2	Q99496	336 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	VSIR	Q9H7M9	311 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	GPN1	Q9HCN4	374 aa	Predicted RBP	11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	GSKIP	Q9P0R6	139 aa		11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	PAIP2B	Q9ULR5	123 aa	Known RBP	11.2	□□□□□ -0.62
NXF1-210	ENST00000531579	OR4C46	A6NHA9	309 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	TOMM40	O96008	361 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	CRYBB3	P26998	211 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	SBSPON	Q8IVN8	264 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	ASCL2	Q99929	193 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	FAM110A	Q9BQ89	295 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	SEC22C	Q9BRL7	303 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	PSENEN	Q9NZ42	101 aa		11.19	□□□□□ -0.62
NXF1-210	ENST00000531579	ZFP92	A6NM28	416 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	PRAF2	O60831	178 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	FAM90A2P	Q658T7	463 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	GRAMD2B	Q96HH9	432 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	C2orf50	Q96LR7	162 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	ZMAT4	Q9H898	229 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	PFDN2	Q9UHV9	154 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	SELENOK	Q9Y6D0	94 aa		11.18	□□□□□ -0.62
NXF1-210	ENST00000531579	IGHV3-49	A0A0A0MS15	119 aa		11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	C5orf51	A6NDU8	294 aa		11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	SNRPGP15	A8MWD9	76 aa		11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	CFD	P00746	253 aa	Predicted RBP	11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	GSG1L	Q6UXU4	331 aa		11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	NRARP	Q7Z6K4	114 aa		11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	OR51G1	Q8NGK1	321 aa		11.17	□□□□□ -0.62
NXF1-210	ENST00000531579		U3KQK5	164 aa		11.17	□□□□□ -0.62
NXF1-210	ENST00000531579	TRAV2	A0A0B4J234	112 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	FAM25E	A8MYX2	175 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	PRSS46	E5RG02	174 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	INMT-MINDY4	F8WBC2	141 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	SSSCA1	O60232	199 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	TSC22D2	O75157	780 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	SCGB1D2	O95969	90 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	APOH	P02749	345 aa	Predicted RBP	11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	IL4	P05112	153 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	PSG1	P11464	419 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	EIF2B2	P49770	351 aa	Known RBP	11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	AP2S1	P53680	142 aa	Predicted RBP	11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	PAX9	P55771	341 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	TCF24	Q7RTU0	167 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	DEFB125	Q8N687	156 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	ST8SIA2	Q92186	375 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	TRGV9	Q99603	122 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	MARVELD1	Q9BSK0	173 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579		U3KQE9	123 aa		11.16	□□□□□ -0.62
NXF1-210	ENST00000531579	IGHV3OR16-13	A0A075B7E8	117 aa		11.15	□□□□□ -0.62
NXF1-210	ENST00000531579	IGHV3-74	A0A0B4J1X5	117 aa		11.15	□□□□□ -0.62
NXF1-210	ENST00000531579		H3BP45	60 aa		11.15	□□□□□ -0.62
NXF1-210	ENST00000531579	DFFB	O76075	338 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms