RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 OR11H7Q8NGC8 314 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 LMX1AQ8TE12 382 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 C2orf15Q8WU43 125 aaKnown RBP2.32□□□□□ -2.04
PTPRK-220ENST00000531466 LRRC29Q8WV35 223 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 CCL17Q92583 94 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 FAM3DQ96BQ1 224 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 PEBP4Q96S96 227 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 GPX7Q96SL4 187 aaPredicted RBP2.32□□□□□ -2.04
PTPRK-220ENST00000531466 LINC01587Q99440 93 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 SDF2Q99470 211 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 SPIN2AQ99865 258 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 SPIN2BQ9BPZ2 258 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 PRSS27Q9BQR3 290 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 C19orf24Q9BVV8 132 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 AICDAQ9GZX7 198 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 FBXL12Q9NXK8 326 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 RBM12B-AS1Q9P1G2 102 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 TAAR3PQ9P1P4 343 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 RABAC1Q9UI14 185 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 AK3Q9UIJ7 227 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 HES2Q9Y543 173 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 DSPPQ9NZW4 1301 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 RGS12O14924 1447 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 ANKARQ7Z5J8 1434 aa2.32□□□□□ -2.04
PTPRK-220ENST00000531466 MROH1Q8NDA8 1641 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF106Q9H2Y7 1883 aaKnown RBP2.31□□□□□ -2.04
PTPRK-220ENST00000531466 AKAP11Q9UKA4 1901 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 LOC389332A0A1B0GUA5 103 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 ODAMA1E959 279 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 A8MWV9 139 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 F8W1H4 67 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 TMEM250H0YL14 139 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 APOC4-APOC2K7ER74 178 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 M0R1X1 148 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 NDUFB3O43676 98 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CD5LO43866 347 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 PITX3O75364 302 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 SCRG1O75711 98 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CST7O76096 145 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 GABARAPO95166 117 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CYB5AP00167 134 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 APOC2P02655 101 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 SCGB1C2P0DMR2 95 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 PYYP10082 97 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 FKBP2P26885 142 aaKnown RBP2.31□□□□□ -2.04
PTPRK-220ENST00000531466 IL3RAP26951 378 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 RPL22P35268 128 aaKnown RBP2.31□□□□□ -2.04
PTPRK-220ENST00000531466 ASIPP42127 132 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CXCL5P42830 114 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CA7P43166 264 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 P2RX1P51575 399 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 MP68P56378 58 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 HERVK_113P63121 156 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 SEC11AP67812 179 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 QRFPP83859 136 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 Q0VG73 95 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 ADIRFQ15847 76 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 ABCA11PQ4W5N1 156 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 C1orf140Q5VVS0 124 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 NXNL2Q5VZ03 156 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 C22orf39Q6P5X5 142 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CLEC20AQ6ZU45 233 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 SLC25A26Q70HW3 274 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 AAED1Q7RTV5 226 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 C17orf82Q86X59 251 aaPredicted RBP2.31□□□□□ -2.04
PTPRK-220ENST00000531466 LYPD1Q8N2G4 141 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 ZCCHC24Q8N2G6 241 aaKnown RBP2.31□□□□□ -2.04
PTPRK-220ENST00000531466 OR4X2Q8NGF9 303 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 OR2T10Q8NGZ9 312 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 SCGB1C1Q8TD33 95 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 GEMIN6Q8WXD5 167 aaKnown RBP2.31□□□□□ -2.04
PTPRK-220ENST00000531466 KLK6Q92876 244 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 LINC00526Q96FQ7 95 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 IMMP2LQ96T52 175 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 TSSK6Q9BXA6 273 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 SLC25A22Q9H936 323 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CA10Q9NS85 328 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 MTFP1Q9UDX5 166 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 CHCHD2Q9Y6H1 151 aaPredicted RBP2.31□□□□□ -2.04
PTPRK-220ENST00000531466 COL1A2P08123 1366 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 PLEKHH2Q8IVE3 1493 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 LRRC7Q96NW7 1537 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 SETBP1Q9Y6X0 1596 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 ADGBQ8N7X0 1667 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 LRRIQ1Q96JM4 1722 aa2.31□□□□□ -2.04
PTPRK-220ENST00000531466 RAI1Q7Z5J4 1906 aaPredicted RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 MTCL1Q9Y4B5 1905 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 TRAV12-2A0A075B6T6 113 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 SMIM26A0A096LP01 95 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 IGKV1D-13A0A0B4J2D9 117 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 IGLC7A0M8Q6 106 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 RBMY1BA6NDE4 496 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 RBMY1EA6NEQ0 496 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 C12orf77C9JDV5 145 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 LGALS9O00182 355 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 AGPAT2O15120 278 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 COX7A2P2O60397 106 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 SERF1AO75920 110 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 SNCGO76070 127 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms