RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 ARHGAP32A7KAX9 2087 aa3.21□□□□□ -1.9
SOX6-214ENST00000531297 MAP1AP78559 2803 aaPredicted RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 IGHV3-72A0A0B4J1Y9 119 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 KANTRA0A1W2PQU2 76 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 IGSF23A1L1A6 192 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 E5RGE8 158 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 H3BUX3 64 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 TRIM77I1YAP6 450 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 UPK2O00526 184 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 TAAR5O14804 337 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 RAMP3O60896 148 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 HLA-DRB1P01911 266 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 SAA1P0DJI8 122 aaPredicted RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 TPT1P13693 172 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 ZP3P21754 424 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 RPL12P30050 165 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 SNCAP37840 140 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 RPL27AP46776 148 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 LINC01547P58512 204 aaPredicted RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 TAS2R30P59541 319 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 SEC61BP60468 96 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 S100A10P60903 97 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 EIF5AP63241 154 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 PSG5Q15238 335 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 TNXAQ16473 311 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 C5orf64Q2M2E5 130 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 DEFB112Q30KQ8 113 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 CXorf66Q5JRM2 361 aaPredicted RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 C9orf152Q5JTZ5 239 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 RPL7L1Q6DKI1 246 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 OR4A47Q6IF82 309 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 WDR73Q6P4I2 378 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 ZNF562Q6V9R5 426 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 HAPLN4Q86UW8 402 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 ZNF429Q86V71 674 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 KRTAP7-1Q8IUC3 87 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 BAP18Q8IXM2 172 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 PUSL1Q8N0Z8 303 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 STPG2Q8N412 459 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 UBAC2Q8NBM4 344 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 TMEM167AQ8TBQ9 72 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 C22orf15Q8WYQ4 148 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 GPR146Q96CH1 333 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 SMIM8Q96KF7 97 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 LINC00052Q96N35 136 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 RBM14Q96PK6 669 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 GINS3Q9BRX5 216 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 ZNF471Q9BX82 626 aaPredicted RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 PLEKHA3Q9HB20 300 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 LYRM2Q9NU23 88 aaPredicted RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 THYN1Q9P016 225 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 CACNG5Q9UF02 275 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 VPREB3Q9UKI3 123 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 FOXA2Q9Y261 457 aaPredicted RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 ZNF257Q9Y2Q1 563 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 NSG2Q9Y328 171 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 SIGLEC9Q9Y336 463 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 STRAPQ9Y3F4 350 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 OR51B2Q9Y5P1 312 aa3.2□□□□□ -1.9
SOX6-214ENST00000531297 ASH1LQ9NR48 2969 aaKnown RBP3.2□□□□□ -1.9
SOX6-214ENST00000531297 FBN2P35556 2912 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 A6NDX4 124 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 C15orf61A6NNL5 157 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 CLDN34H7C241 214 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 CORTO00230 105 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 TCF21O43680 179 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 SYNGR2O43760 224 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 NDUFA3O95167 84 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 IFNA10P01566 189 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 IGKV1-16P04430 117 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 SPP1P10451 314 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 DEFA4P12838 97 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 HIST1H1BP16401 226 aaKnown RBP3.19□□□□□ -1.9
SOX6-214ENST00000531297 ADCYAP1P18509 176 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 S100A7P31151 101 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 IER3P46695 156 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 SULT1A2P50226 295 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 DLX1P56177 255 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 POLR2GP62487 172 aaKnown RBP eCLIP3.19□□□□□ -1.9
SOX6-214ENST00000531297 GNB1P62873 340 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 HBG1P69891 147 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 HBG2P69892 147 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 SLC35B1P78383 322 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 EWSR1Q01844 656 aaKnown RBP eCLIP3.19□□□□□ -1.9
SOX6-214ENST00000531297 PRB3Q04118 309 aaPredicted RBP3.19□□□□□ -1.9
SOX6-214ENST00000531297 TNFRSF9Q07011 255 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 DIAPH2-AS1Q14236 149 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 FXYD3Q14802 87 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 LY6EQ16553 131 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 PRSS8Q16651 343 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 PDLIM3Q53GG5 364 aaPredicted RBP3.19□□□□□ -1.9
SOX6-214ENST00000531297 KLF17Q5JT82 389 aaPredicted RBP3.19□□□□□ -1.9
SOX6-214ENST00000531297 C10orf91Q5T1B1 145 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 ETFRF1Q6IPR1 90 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 BTNL8Q6UX41 500 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 SLC35E3Q7Z769 313 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 S100A7AQ86SG5 101 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 STX12Q86Y82 276 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 TMEM252Q8N6L7 170 aa3.19□□□□□ -1.9
SOX6-214ENST00000531297 SIGLECL1Q8N7X8 197 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms