RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 PSMB3P49720 205 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 CCL11P51671 97 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 RPL38P63173 70 aaKnown RBP4.46□□□□□ -1.7
CD44-231ENST00000531110 PLGLB1Q02325 96 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 ZNF90Q03938 601 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 DIAPH2-AS1Q14236 149 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 KIAA1644Q3SXP7 199 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 LINC01620Q4KN68 170 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 C1orf195Q5TG92 126 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 C2orf91Q6ZV80 131 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 TEN1Q86WV5 123 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 C3orf22Q8N5N4 141 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 MORN4Q8NDC4 146 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 CHCHD1Q96BP2 118 aaKnown RBP4.46□□□□□ -1.7
CD44-231ENST00000531110 ATXN7L3BQ96GX2 97 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 SLC25A44Q96H78 314 aaPredicted RBP4.46□□□□□ -1.7
CD44-231ENST00000531110 C9orf85Q96MD7 179 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 PRELID3AQ96N28 172 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 TAAR2Q9P1P5 351 aa4.46□□□□□ -1.7
CD44-231ENST00000531110 CHCHD2Q9Y6H1 151 aaPredicted RBP4.46□□□□□ -1.7
CD44-231ENST00000531110 BRWD3Q6RI45 1802 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 A0A087WYN8 130 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 NSG1A0A0A6YYJ2 146 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 IGHV1-24A0A0C4DH33 117 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 C3orf85A0A1B0GTC6 90 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 TEX50A0A1B0GTY4 177 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 LOC107986453A0A1B0GWG9 222 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 M0R129 80 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 CHEK1O14757 476 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 SH2D1BO14796 132 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 MPDU1O75352 247 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 ATP5LO75964 103 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 APCSP02743 223 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 B4GALT1P15291 398 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 SP4Q02446 784 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 TGFBR3Q03167 851 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 PRDX1Q06830 199 aaKnown RBP4.45□□□□□ -1.7
CD44-231ENST00000531110 LOXL1Q08397 574 aaPredicted RBP4.45□□□□□ -1.7
CD44-231ENST00000531110 EBI3Q14213 229 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 ZNF791Q3KP31 576 aaPredicted RBP4.45□□□□□ -1.7
CD44-231ENST00000531110 KRTAP24-1Q3LI83 254 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 PHLDA2Q53GA4 152 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 NMSQ5H8A3 153 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 FAM19A1Q7Z5A9 133 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 LHFPL1Q86WI0 220 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 STHQ8IWL8 128 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 GAPTQ8N292 157 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 ABHD12Q8N2K0 398 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 C15orf53Q8NAA6 179 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 KLHDC9Q8NEP7 349 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 SAP25Q8TEE9 199 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 PELI1Q96FA3 418 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 LINC00479Q96M42 142 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 TMEM59Q9BXS4 323 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 SLC25A39Q9BZJ4 359 aaPredicted RBP4.45□□□□□ -1.7
CD44-231ENST00000531110 C5orf66Q9H5L9 145 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 EDA2RQ9HAV5 297 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 HRASLS2Q9NWW9 162 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 IL36BQ9NZH7 164 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 KLF12Q9Y4X4 402 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 TIMM9Q9Y5J7 89 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 INSIG2Q9Y5U4 225 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 CASP8AP2Q9UKL3 1982 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 DOCK6Q96HP0 2047 aa4.45□□□□□ -1.7
CD44-231ENST00000531110 TMED7-TICAM2A0A0A6YYA0 188 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 EPM2AB3EWF7 344 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 J3QLW9 94 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 FFAR1O14842 300 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 LINC01565O15544 149 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 SSSCA1O60232 199 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 CECR9P0C854 216 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 CRYGSP22914 178 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 RPL34P49207 117 aaKnown RBP4.44□□□□□ -1.7
CD44-231ENST00000531110 CCL20P78556 96 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 ETDBQ3ZM63 59 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 MS4A13Q5J8X5 152 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 CFAP126Q5VTH2 177 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 TMEM207Q6UWW9 146 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 Q71RC1 249 aaPredicted RBP4.44□□□□□ -1.7
CD44-231ENST00000531110 ZNF550Q7Z398 422 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 C11orf53Q8IXP5 236 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 CIARTQ8N365 385 aaPredicted RBP4.44□□□□□ -1.7
CD44-231ENST00000531110 SLC25A45Q8N413 288 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 ZNF721Q8TF20 911 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 TSKUQ8WUA8 353 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 CT55Q8WUE5 264 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 COPS9Q8WXC6 57 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 BMFQ96LC9 184 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 C17orf77Q96MU5 243 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 AMELYQ99218 206 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 TMEM222Q9H0R3 208 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 C11orf1Q9H5F2 150 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 GNB4Q9HAV0 340 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 KLF13Q9Y2Y9 288 aaPredicted RBP4.44□□□□□ -1.7
CD44-231ENST00000531110 TMED7Q9Y3B3 224 aa4.44□□□□□ -1.7
CD44-231ENST00000531110 PLXNA1Q9UIW2 1896 aa4.43□□□□□ -1.7
CD44-231ENST00000531110 SCN2AQ99250 2005 aa4.43□□□□□ -1.7
CD44-231ENST00000531110 TRBV20-1A0A075B6N2 111 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms