RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 FAM24AA6NFZ4 105 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 F8W036 122 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 DNASE2O00115 360 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-221ENST00000531068 SYNGR2O43760 224 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 SCO1O75880 301 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 APELAP0DMC3 54 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 BTN1A1Q13410 526 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 KLF5Q13887 457 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-221ENST00000531068 ATP6V1FQ16864 119 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 Q6ZRG5 221 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 VKORC1L1Q8N0U8 176 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 NECAP1Q8NC96 275 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 PRR25Q96S07 402 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 ATP5SQ99766 215 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 PSMG3Q9BT73 122 aaPredicted RBP8.44□□□□□ -1.06
CAPN1-221ENST00000531068 SCRT1Q9BWW7 348 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 HRH4Q9H3N8 390 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 HSPB7Q9UBY9 170 aa8.44□□□□□ -1.06
CAPN1-221ENST00000531068 TRBV9A0A0B4J1U6 114 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 LOC105371267A0A1B0GV96 52 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 UPK2O00526 184 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 SSSCA1O60232 199 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 HBE1P02100 147 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 RPL27AP46776 148 aaKnown RBP8.43□□□□□ -1.06
CAPN1-221ENST00000531068 RPL8P62917 257 aaKnown RBP8.43□□□□□ -1.06
CAPN1-221ENST00000531068 HBG1P69891 147 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 HBG2P69892 147 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 RHOGP84095 191 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 SERF2P84101 59 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 DEFA5Q01523 94 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 OR4A47Q6IF82 309 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 OR52E5Q8NH55 327 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 BSCL2Q96G97 398 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-221ENST00000531068 NARS2Q96I59 477 aaKnown RBP8.43□□□□□ -1.06
CAPN1-221ENST00000531068 TREM1Q9NP99 234 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.43□□□□□ -1.06
CAPN1-221ENST00000531068 TMEM14BQ9NUH8 114 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 TMEM140Q9NV12 185 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 BET1LQ9NYM9 111 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 ZNF257Q9Y2Q1 563 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 SMAD5-AS1Q9Y6J3 95 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 DNAH3Q8TD57 4116 aa8.43□□□□□ -1.06
CAPN1-221ENST00000531068 IFNA5P01569 189 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 ATP6V0CP27449 155 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 CAMLGP49069 296 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 AKR1C2P52895 323 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 RAB2AP61019 212 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 RPEL1Q2QD12 228 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 SSX9Q7RTT3 188 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 H2BFWTQ7Z2G1 175 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 CLRN3Q8NCR9 226 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 OR9G4Q8NGQ1 327 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 OR5C1Q8NGR4 320 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 CIB3Q96Q77 187 aaPredicted RBP8.42□□□□□ -1.06
CAPN1-221ENST00000531068 SMIM3Q9BZL3 60 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 TUBA4BQ9H853 241 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 TIMM9Q9Y5J7 89 aa8.42□□□□□ -1.06
CAPN1-221ENST00000531068 CGB1A6NKQ9 187 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 C15orf61A6NNL5 157 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 NPIPB5A8MRT5 1133 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 TEX22C9J3V5 150 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 CRYGCP07315 174 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 DEFA4P12838 97 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 HIST1H1BP16401 226 aaKnown RBP8.41□□□□□ -1.06
CAPN1-221ENST00000531068 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 SYNJ2BPP57105 145 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 ERVK-16P61578 105 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 TNFRSF9Q07011 255 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 GUK1Q16774 197 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 C10orf55Q5SWW7 151 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 ATRAIDQ6UW56 229 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 TMEM14EPQ6UXP3 125 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 OR10G4Q8NGN3 311 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 OR2G3Q8NGZ4 309 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 RNASE11Q8TAA1 199 aaKnown RBP8.41□□□□□ -1.06
CAPN1-221ENST00000531068 PINX1Q96BK5 328 aaKnown RBP8.41□□□□□ -1.06
CAPN1-221ENST00000531068 SRSF8Q9BRL6 282 aaKnown RBP8.41□□□□□ -1.06
CAPN1-221ENST00000531068 QTRT1Q9BXR0 403 aaKnown RBP8.41□□□□□ -1.06
CAPN1-221ENST00000531068 COMMD5Q9GZQ3 224 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 SIGLEC8Q9NYZ4 499 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 PEMTQ9UBM1 199 aa8.41□□□□□ -1.06
CAPN1-221ENST00000531068 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
CAPN1-221ENST00000531068 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.4□□□□□ -1.06
CAPN1-221ENST00000531068 CYB5BO43169 146 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 OR2J3O76001 311 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 IGLV1-51P01701 117 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 PRH1P02810 166 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 GP9P14770 177 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 SRSF3P84103 164 aaKnown RBP8.4□□□□□ -1.06
CAPN1-221ENST00000531068 GUCA2BQ16661 112 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 C15orf32Q32M92 178 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 MBD3L1Q8WWY6 194 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 MAGT1Q9H0U3 335 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 SLC35B3Q9H1N7 401 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 RBKSQ9H477 322 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 PSENENQ9NZ42 101 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 FBXL7Q9UJT9 491 aa8.4□□□□□ -1.06
CAPN1-221ENST00000531068 TEX50A0A1B0GTY4 177 aa8.39□□□□□ -1.07
CAPN1-221ENST00000531068 E7EUB6 86 aa8.39□□□□□ -1.07
CAPN1-221ENST00000531068 INS-IGF2F8WCM5 200 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms