RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 AKR1D1P51857 326 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 TAS2R60P59551 318 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
PCF11-205ENST00000530906 GNB1P62873 340 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 RPL11P62913 178 aaKnown RBP4.44□□□□□ -1.7
PCF11-205ENST00000530906 FABP9Q0Z7S8 132 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 EBI3Q14213 229 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 TNXAQ16473 311 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 MRGPRG-AS1Q2M3A8 158 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 TIGITQ495A1 244 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 COA6Q5JTJ3 125 aaKnown RBP4.44□□□□□ -1.7
PCF11-205ENST00000530906 C16orf82Q7Z2V1 217 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 OR10W1Q8NGF6 305 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 ITLN2Q8WWU7 325 aaPredicted RBP4.44□□□□□ -1.7
PCF11-205ENST00000530906 IGFBPL1Q8WX77 278 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 NPIPB3Q92617 1050 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 ACY3Q96HD9 319 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 SFRP2Q96HF1 295 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 ZNF48Q96MX3 618 aaPredicted RBP4.44□□□□□ -1.7
PCF11-205ENST00000530906 WWC2-AS2Q96NR7 200 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 RBM14Q96PK6 669 aaKnown RBP4.44□□□□□ -1.7
PCF11-205ENST00000530906 CHRDL1Q9BU40 450 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 TNFRSF19Q9NS68 423 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 C1RLQ9NZP8 487 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 ZNRD1Q9P1U0 126 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 PITPNC1Q9UKF7 332 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 CDC42EP3Q9UKI2 254 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 URGCP-MRPS24S4R325 110 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 MALRD1Q5VYJ5 2156 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 ROS1P08922 2347 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 TGIF2-C20orf24A0A0A6YYL0 155 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 TRBV9A0A0B4J1U6 114 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HELTA6NFD8 242 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 ZNF98A6NK75 572 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 TEX22C9J3V5 150 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 LYNX1G3V0Z9 82 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 ISLRO14498 428 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 TIMM23O14925 209 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BKO60814 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 FOXH1O75593 365 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BJP06899 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 LYNX1P0DP58 116 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 MYOD1P15172 320 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BOP23527 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 NPPCP23582 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 COX7A1P24310 79 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 S100A2P29034 98 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BBP33778 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 GNG4P50150 75 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 CNN1P51911 297 aaKnown RBP4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BDP58876 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 UBE2G2P60604 165 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BCP62807 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 UBE2L3P68036 154 aaKnown RBP4.43□□□□□ -1.7
PCF11-205ENST00000530906 DIAPH2-AS1Q14236 149 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 PLGLAQ15195 96 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST2H2BEQ16778 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.43□□□□□ -1.7
PCF11-205ENST00000530906 ZNF343Q6P1L6 599 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 TEX38Q6PEX7 206 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 MIR17HGQ75NE6 70 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 ZFP82Q8N141 532 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 OR10G8Q8NGN5 311 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 OR4X1Q8NH49 305 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 SRSF12Q8WXF0 261 aaKnown RBP4.43□□□□□ -1.7
PCF11-205ENST00000530906 CFHR4Q92496 578 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BHQ93079 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 FAM167A-AS1Q96KT0 104 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BNQ99877 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H2BMQ99879 126 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 FNDC4Q9H6D8 234 aaPredicted RBP4.43□□□□□ -1.7
PCF11-205ENST00000530906 LPAR2Q9HBW0 351 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 OSTCQ9NRP0 149 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 TMEM14CQ9P0S9 112 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 FBXL7Q9UJT9 491 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 YTHDF2Q9Y5A9 579 aaKnown RBP4.43□□□□□ -1.7
PCF11-205ENST00000530906 PIEZO2Q9H5I5 2752 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 LOC400499M0QZD8 3231 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 MGAQ8IWI9 3026 aa4.43□□□□□ -1.7
PCF11-205ENST00000530906 TRBV20OR9-2A0A075B6H5 130 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 IGKV1D-37A0A075B6S9 117 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 IGHV2-70DA0A0C4DH43 119 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 NPIPB5A8MRT5 1133 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 E7EUB6 86 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 NDUFS8O00217 210 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 HYPMO75409 117 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 EIF3GO75821 320 aaKnown RBP eCLIP4.42□□□□□ -1.7
PCF11-205ENST00000530906 CNIH1O95406 144 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 MT-ND6P03923 174 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 TRGC2P03986 189 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 IGF2RP11717 2491 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 DEFA4P12838 97 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 HIST1H1BP16401 226 aaKnown RBP4.42□□□□□ -1.7
PCF11-205ENST00000530906 FCGR2BP31994 310 aaPredicted RBP4.42□□□□□ -1.7
PCF11-205ENST00000530906 BRS3P32247 399 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 RPL35P42766 123 aaKnown RBP4.42□□□□□ -1.7
PCF11-205ENST00000530906 UBE2E1P51965 193 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 LGALS4P56470 323 aa4.42□□□□□ -1.7
PCF11-205ENST00000530906 MMDQ15546 238 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms