RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 TIGITQ495A1 244 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 LYZL2Q7Z4W2 148 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 APRG1Q8IVJ8 170 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 OR1S2Q8NGQ3 325 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 MAP6D1Q9H9H5 199 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 HSPB7Q9UBY9 170 aa9.86□□□□□ -0.83
VPS28-211ENST00000530790 SPRY2O43597 315 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 DFFBO76075 338 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 IFNA10P01566 189 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 IGKV1-17P01599 117 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 IGLC1P0CG04 106 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 OR10J1P30954 320 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 TMEM128Q5BJH2 165 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 SPANXN2Q5MJ10 180 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 PRSS54Q6PEW0 395 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 CCDC190Q86UF4 302 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 OR1S1Q8NH92 325 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 DTD1Q8TEA8 209 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 MS4A6AQ9H2W1 248 aa9.85□□□□□ -0.83
VPS28-211ENST00000530790 TRAV2A0A0B4J234 112 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 DUXBA0A1W2PPF3 345 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 VAMP1P23763 118 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 CRYBB3P26998 211 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 P2RY1P47900 373 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 ZNF124Q15973 351 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 WFDC3Q8IUB2 231 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 TMEM170AQ8WVE7 144 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 ACY3Q96HD9 319 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 GRAMD2BQ96HH9 432 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 SLC25A21Q9BQT8 299 aaPredicted RBP9.84□□□□□ -0.83
VPS28-211ENST00000530790 RBKSQ9H477 322 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 RABAC1Q9UI14 185 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 U3KQ87 197 aa9.84□□□□□ -0.83
VPS28-211ENST00000530790 INPP1P49441 399 aa9.83□□□□□ -0.84
VPS28-211ENST00000530790 EIF2B2P49770 351 aaKnown RBP9.83□□□□□ -0.84
VPS28-211ENST00000530790 YPEL3P61236 119 aaPredicted RBP9.83□□□□□ -0.84
VPS28-211ENST00000530790 LILRB2Q8N423 598 aa9.83□□□□□ -0.84
VPS28-211ENST00000530790 STXBP6Q8NFX7 210 aa9.83□□□□□ -0.84
VPS28-211ENST00000530790 Q8WTZ3 238 aa9.83□□□□□ -0.84
VPS28-211ENST00000530790 RNF183Q96D59 192 aa9.83□□□□□ -0.84
VPS28-211ENST00000530790 STARD9Q9P2P6 4700 aa9.83□□□□□ -0.84
VPS28-211ENST00000530790 CSMD3Q7Z407 3707 aa9.83□□□□□ -0.84
VPS28-211ENST00000530790 A0A0J9YWU9 116 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 JTBO76095 146 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 IFNA4P05014 189 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 IL4P05112 153 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 HNRNPCP07910 306 aaKnown RBP eCLIP9.82□□□□□ -0.84
VPS28-211ENST00000530790 DEFB131AP59861 70 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 RBMS2Q15434 407 aaKnown RBP9.82□□□□□ -0.84
VPS28-211ENST00000530790 TRIQKQ629K1 86 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 LYG2Q86SG7 212 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 CENPSQ8N2Z9 138 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 NPIPB3Q92617 1050 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 SRRQ9GZT4 340 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 CSTL1Q9H114 145 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
VPS28-211ENST00000530790 TENM2Q9NT68 2774 aa9.82□□□□□ -0.84
VPS28-211ENST00000530790 MPTX1A8MV57 137 aa9.81□□□□□ -0.84
VPS28-211ENST00000530790 ATP5IP56385 69 aaPredicted RBP9.81□□□□□ -0.84
VPS28-211ENST00000530790 PPP1R1AQ13522 171 aa9.81□□□□□ -0.84
VPS28-211ENST00000530790 LEMD1Q68G75 181 aa9.81□□□□□ -0.84
VPS28-211ENST00000530790 LRTM2Q8N967 370 aa9.81□□□□□ -0.84
VPS28-211ENST00000530790 CXorf65A6NEN9 183 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 HELTA6NFD8 242 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 K7EQG2 157 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 SFT2D2O95562 160 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 TOMM40O96008 361 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 RD3LP0DJH9 198 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 SLC25A6P12236 298 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 STHQ8IWL8 128 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 FAM24BQ8N5W8 94 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 TMEM217Q8N7C4 229 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 GATAD1Q8WUU5 269 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 SLC35E1Q96K37 410 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 TMED3Q9Y3Q3 217 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 RYR2Q92736 4967 aa9.8□□□□□ -0.84
VPS28-211ENST00000530790 NAP1L6A6NFF2 107 aa9.79□□□□□ -0.84
VPS28-211ENST00000530790 FAM90A26D6RGX4 464 aa9.79□□□□□ -0.84
VPS28-211ENST00000530790 PITX3O75364 302 aa9.79□□□□□ -0.84
VPS28-211ENST00000530790 MED6O75586 246 aa9.79□□□□□ -0.84
VPS28-211ENST00000530790 CA1P00915 261 aaPredicted RBP9.79□□□□□ -0.84
VPS28-211ENST00000530790 IAPPP10997 89 aa9.79□□□□□ -0.84
VPS28-211ENST00000530790 NUP62P37198 522 aaPredicted RBP9.79□□□□□ -0.84
VPS28-211ENST00000530790 UBE2MP61081 183 aaKnown RBP9.79□□□□□ -0.84
VPS28-211ENST00000530790 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
VPS28-211ENST00000530790 USF2Q15853 346 aaPredicted RBP9.79□□□□□ -0.84
VPS28-211ENST00000530790 U3KQE9 123 aa9.79□□□□□ -0.84
VPS28-211ENST00000530790 NUPR2A6NF83 97 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 ZFP92A6NM28 416 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 FABP1P07148 127 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 PSG1P11464 419 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 ATF4P18848 351 aaPredicted RBP9.78□□□□□ -0.84
VPS28-211ENST00000530790 GPX4P36969 197 aaPredicted RBP9.78□□□□□ -0.84
VPS28-211ENST00000530790 AP2S1P53680 142 aaPredicted RBP9.78□□□□□ -0.84
VPS28-211ENST00000530790 RAB11AP62491 216 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 C16orf54Q6UWD8 224 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 DCANP1Q8TF63 244 aa9.78□□□□□ -0.84
VPS28-211ENST00000530790 GLMPQ8WWB7 406 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms