RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 NAV3Q8IVL0 2385 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 DIRC3C9JPN6 131 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 SLC25A17O43808 307 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 SLAQ13239 276 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 LRRC10Q5BKY1 277 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 FAM231DQ6ZW35 169 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 LINC00305Q7Z4B0 112 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 LINC00311Q8N616 119 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 ZNF596Q8TC21 504 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 TPSG1Q9NRR2 321 aa15.68■□□□□ 0.1
PCF11-203ENST00000530304 M0QZK8 103 aa15.67■□□□□ 0.1
PCF11-203ENST00000530304 PLAUP00749 431 aa15.67■□□□□ 0.1
PCF11-203ENST00000530304 MBD6Q96DN6 1003 aa15.67■□□□□ 0.1
PCF11-203ENST00000530304 A0A1W2PPI3 338 aa15.67■□□□□ 0.1
PCF11-203ENST00000530304 TNFRSF13BO14836 293 aaPredicted RBP15.67■□□□□ 0.1
PCF11-203ENST00000530304 C8orf31Q8N9H6 132 aa15.67■□□□□ 0.1
PCF11-203ENST00000530304 NUDT10Q8NFP7 164 aa15.67■□□□□ 0.1
PCF11-203ENST00000530304 NUDT11Q96G61 164 aa15.67■□□□□ 0.1
PCF11-203ENST00000530304 ZNF324O75467 553 aaPredicted RBP15.66■□□□□ 0.1
PCF11-203ENST00000530304 THBDP07204 575 aa15.66■□□□□ 0.1
PCF11-203ENST00000530304 TBR1Q16650 682 aa15.66■□□□□ 0.1
PCF11-203ENST00000530304 TMEM68Q96MH6 324 aa15.66■□□□□ 0.1
PCF11-203ENST00000530304 CTSZQ9UBR2 303 aa15.66■□□□□ 0.1
PCF11-203ENST00000530304 ROS1P08922 2347 aa15.66■□□□□ 0.1
PCF11-203ENST00000530304 RUSC1-AS1Q66K80 236 aa15.66■□□□□ 0.1
PCF11-203ENST00000530304 WIPF2Q8TF74 440 aaPredicted RBP15.66■□□□□ 0.1
PCF11-203ENST00000530304 SSUH2Q9Y2M2 353 aa15.66■□□□□ 0.1
PCF11-203ENST00000530304 G0S2P27469 103 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 GNG5P63218 68 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 MRGPRG-AS1Q2M3A8 158 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 VMA21Q3ZAQ7 101 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 PRR27Q6MZM9 219 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 MRPL52Q86TS9 123 aaKnown RBP15.65■□□□□ 0.1
PCF11-203ENST00000530304 NUP35Q8NFH5 326 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 TSKUQ8WUA8 353 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 GRAMD2BQ96HH9 432 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 ORM2P19652 201 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 MFAP2P55001 183 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 RASL11AQ6T310 242 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 FAM19A2Q8N3H0 131 aa15.65■□□□□ 0.1
PCF11-203ENST00000530304 LOXP28300 417 aaPredicted RBP15.64■□□□□ 0.1
PCF11-203ENST00000530304 MYCNOSP40205 109 aa15.64■□□□□ 0.1
PCF11-203ENST00000530304 ZNF137PP52743 207 aa15.64■□□□□ 0.1
PCF11-203ENST00000530304 CEP250Q9BV73 2442 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 PLXNB1O43157 2135 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 C22orf46C9J442 243 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 ENSAO43768 121 aaKnown RBP15.64■□□□□ 0.09
PCF11-203ENST00000530304 MOSP00540 346 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 DLX6P56179 175 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 GDF5OSQ5U4N7 250 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 HCP5Q6MZN7 132 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 LHFPL4Q7Z7J7 247 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 NIT1Q86X76 327 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 OR4B1Q8NGF8 309 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 C18orf32Q8TCD1 76 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 TNFRSF19Q9NS68 423 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 CUL9Q8IWT3 2517 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 IGHV3-72A0A0B4J1Y9 119 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 MC5RP33032 325 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 ZNF841Q6ZN19 808 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 OR1B1Q8NGR6 318 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 BLNKQ8WV28 456 aa15.64■□□□□ 0.09
PCF11-203ENST00000530304 PRRG2O14669 202 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 KLK10O43240 276 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 CASP6P55212 293 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 ASCL5Q7RTU5 278 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 SPACA3Q8IXA5 215 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 SGK494Q96LW2 274 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 EPDR1Q9UM22 224 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 TTC28Q96AY4 2481 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 DCHS1Q96JQ0 3298 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 ADGRG4Q8IZF6 3080 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 RPLP1P05386 114 aaKnown RBP15.63■□□□□ 0.09
PCF11-203ENST00000530304 C3orf79P0CE67 100 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 C7orf69Q9H7B7 122 aa15.63■□□□□ 0.09
PCF11-203ENST00000530304 IGLC7A0M8Q6 106 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 PRRX1P54821 245 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 UBE2G1P62253 170 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 ETFRF1Q6IPR1 90 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 PERPQ96FX8 193 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 SH3BGRL2Q9UJC5 107 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 KALRNO60229 2985 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 CORTO00230 105 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 SLC25A5P05141 298 aaKnown RBP15.62■□□□□ 0.09
PCF11-203ENST00000530304 CRYGCP07315 174 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 IGHV1-8P0DP01 117 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 HIST1H1EP10412 219 aaKnown RBP15.62■□□□□ 0.09
PCF11-203ENST00000530304 ZNF25P17030 456 aaPredicted RBP15.62■□□□□ 0.09
PCF11-203ENST00000530304 NTF3P20783 257 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 CTRLP40313 264 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 LGALS7P47929 136 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 TMEM155Q4W5P6 130 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 STXBP6Q8NFX7 210 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 CHRDL1Q9BU40 450 aa15.62■□□□□ 0.09
PCF11-203ENST00000530304 MRPL27Q9P0M9 148 aaKnown RBP15.62■□□□□ 0.09
PCF11-203ENST00000530304 PGPA6NDG6 321 aa15.61■□□□□ 0.09
PCF11-203ENST00000530304 HIGD1CA8MV81 97 aa15.61■□□□□ 0.09
PCF11-203ENST00000530304 APELAP0DMC3 54 aa15.61■□□□□ 0.09
PCF11-203ENST00000530304 SPATA45Q537H7 98 aa15.61■□□□□ 0.09
PCF11-203ENST00000530304 C19orf35Q6ZS72 473 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms