RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 PRCDQ00LT1 54 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 OVOL2Q9BRP0 275 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 IL18BPO95998 194 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 CLPSP04118 112 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 ORMDL3Q8N138 153 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 IMMP2LQ96T52 175 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 TFF1P04155 84 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 CRYGSP22914 178 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 TIMP3P35625 211 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 HSD52Q0P140 79 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 VMO1Q7Z5L0 202 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 ST20Q9HBF5 79 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 NDUFA3O95167 84 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 GATA2P23769 480 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-221ENST00000529873 FOXA3P55318 350 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-221ENST00000529873 C9orf153Q5TBE3 101 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 SMIM20Q8N5G0 67 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 FAM89BQ8N5H3 189 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM190Q8WZ59 177 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 ST6GALNAC6Q969X2 333 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 RNF125Q96EQ8 232 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 ERG28Q9UKR5 140 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 V9GYY9 64 aa7.06□□□□□ -1.28
CTNND1-221ENST00000529873 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-221ENST00000529873 IGKV1-9A0A0C4DH69 117 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 TOMM40O96008 361 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 MALP21145 153 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 CT83Q5H943 113 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 C1orf194Q5T5A4 169 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 SAMD5Q5TGI4 173 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 TRAV9-2A0A087WT02 112 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 NPSP0C0P6 89 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 GGNQ86UU5 652 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 RNF126Q9BV68 326 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 EPDR1Q9UM22 224 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 TRGV2A0A075B6R0 118 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 DPM2O94777 84 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 ADMP35318 185 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 LINC01559Q495D7 138 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 Q8NFD4 153 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 NEUROG3Q9Y4Z2 214 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 PRRC2BQ5JSZ5 2229 aaKnown RBP7.05□□□□□ -1.28
CTNND1-221ENST00000529873 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-221ENST00000529873 GAGE12BA1L429 117 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 M0R2P5 195 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 WNT2P09544 360 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 RPL23P62829 140 aaKnown RBP7.05□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM42Q69YG0 159 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 MUC21A0A0G2JKD1 596 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 MUC21A0A140T8X8 626 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 FABP5P3A8MUU1 101 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 TNFSF13O75888 250 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 CD7P09564 240 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 PSG1P11464 419 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 IFI27P40305 119 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM155Q4W5P6 130 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 MUC21Q5SSG8 566 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 SIGLEC15Q6ZMC9 328 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 C8orf46Q8TAG6 207 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
CTNND1-221ENST00000529873 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 DUTP33316 252 aaKnown RBP7.04□□□□□ -1.28
CTNND1-221ENST00000529873 CCL20P78556 96 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 RHOGP84095 191 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 MORN3Q6PF18 240 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-221ENST00000529873 NABP1Q96AH0 204 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 DNAJC30Q96LL9 226 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 GFI1Q99684 422 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 F8VVB4 439 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 F8VWA3 439 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 PRB3Q04118 309 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-221ENST00000529873 OVOL1O14753 267 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 METRNQ9UJH8 293 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 IGHV2-26A0A0B4J1V2 119 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
CTNND1-221ENST00000529873 GTSCR1Q86UQ5 136 aa7.04□□□□□ -1.28
CTNND1-221ENST00000529873 CHD5Q8TDI0 1954 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 IGHV3OR16-8A0A075B7F1 116 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 TRAV8-1A0A0A6YYK1 113 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM8BA6NDV4 472 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 PRR32B1ATL7 298 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 TIMM23O14925 209 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 SRSF1Q07955 248 aaKnown RBP eCLIP7.03□□□□□ -1.281e-7■□□□□ 10.7
CTNND1-221ENST00000529873 OR9G4Q8NGQ1 327 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 WFDC1Q9HC57 220 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 FAM166AQ6J272 317 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM170AQ8WVE7 144 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 GLMPQ8WWB7 406 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 RNASE7Q9H1E1 156 aaKnown RBP7.03□□□□□ -1.28
CTNND1-221ENST00000529873 NRN1Q9NPD7 142 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 TRAV5A0A0B4J249 113 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 ERVK11-1P61568 191 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 FOXF2Q12947 444 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 PAQR4Q8N4S7 273 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-221ENST00000529873 KLHDC3Q9BQ90 382 aa7.03□□□□□ -1.28
CTNND1-221ENST00000529873 TMEM126AQ9H061 195 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms