RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RHPN1-AS1Q9BWJ2 59 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 HINT2Q9BX68 163 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 MRPS26Q9BYN8 205 aaKnown RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 GEMIN7Q9H840 131 aaKnown RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 SCRT2Q9NQ03 307 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 HSF4Q9ULV5 492 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 A0A087WXM4 84 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 TMEM272A0A1B0GTI8 110 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 A0A1B0GV72 72 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 CHEK1O14757 476 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 IGLV2-14P01704 120 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 AMBPP02760 352 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 GIG44P09565 113 aaPredicted RBP2.54□□□□□ -2
PTPRC-213ENST00000529828 NBEAP1P0C6P0 100 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 P0DMU3 169 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 FAM231AP0DMU4 169 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 FAM231CP0DMU5 169 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 ADMP35318 185 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 WNT4P56705 351 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 BRWD1-AS2P59051 145 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 OR2B8PP59922 312 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 NHLH2Q02577 135 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 C12orf74Q32Q52 190 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 Q56UQ5 140 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 AHSA2Q719I0 299 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 OR56B1Q8NGI3 324 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 OR4S2Q8NH73 311 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 VSTM2AQ8TAG5 236 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 CYGBQ8WWM9 190 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 RAB3CQ96E17 227 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 RNF126Q9BV68 326 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 HRH4Q9H3N8 390 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 HRASLSQ9HDD0 168 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 SMPXQ9UHP9 88 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 TBC1D24Q9ULP9 559 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 X6R8D5 127 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 DNAH8Q96JB1 4490 aa2.54□□□□□ -2
PTPRC-213ENST00000529828 IGHV7-4-1A0A0J9YVY3 117 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 METTL21EPA6NDL7 271 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 FABP12A6NFH5 140 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 C15orf61A6NNL5 157 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 KNCNA6PVL3 124 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 NDUFA4O00483 81 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 SLC17A2O00624 439 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 CTDSP2O14595 271 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 IGHV3-48P01763 117 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 APOHP02749 345 aaPredicted RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 OR13C7P0DN81 318 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 EMP1P54849 157 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 RPL11P62913 178 aaKnown RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 LGALS9BQ3B8N2 356 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 TIMM50Q3ZCQ8 353 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 TMEM41BQ5BJD5 291 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 DNLZQ5SXM8 178 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 Q6ZR54 194 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 Q6ZRM9 215 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 TCF24Q7RTU0 167 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 STHQ8IWL8 128 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 TMEM116Q8NCL8 245 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 RAB24Q969Q5 203 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 FAM3DQ96BQ1 224 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 ZNF414Q96IQ9 312 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 NDUFAF3Q9BU61 184 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 RBM38Q9H0Z9 239 aaKnown RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 NIT2Q9NQR4 276 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 C21orf62Q9NYP8 219 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 TPRKBQ9Y3C4 175 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 ETV7Q9Y603 341 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 TEX13DA0A0J9YY54 714 aaPredicted RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 LINC00862A6NCI5 91 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 FBLL1A6NHQ2 334 aaKnown RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 CENPXA8MT69 81 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 DNASE2O00115 360 aaPredicted RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 SULT1C2O00338 296 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 MFNGO00587 321 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 ARPC5O15511 151 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 DLEU1O43261 78 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 CDK2AP2O75956 126 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 IFNA21P01568 189 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 IFNA17P01571 189 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 CD1AP06126 327 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 UCHL1P09936 223 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 CD37P11049 281 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 PTHLHP12272 177 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 MIFP14174 115 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 HTN3P15516 51 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 HIST1H1DP16402 221 aaKnown RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 RPS25P62851 125 aaKnown RBP2.53□□□□□ -2
PTPRC-213ENST00000529828 WT1-ASQ06250 92 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 ARL6IP1Q15041 203 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 TRAM1Q15629 374 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 PSG3Q16557 428 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 KLK9Q2XQG4 91 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 SOHLH1Q5JUK2 328 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 C1orf134Q5TEV5 83 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 LIPKQ5VXJ0 399 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 LAIR2Q6ISS4 152 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 Q8N1X5 172 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 MFSD4AQ8N468 514 aa2.53□□□□□ -2
PTPRC-213ENST00000529828 DHRSXQ8N5I4 330 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms