RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 CKS1BP61024 79 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 COLCA2A8K830 154 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 MYOD1P15172 320 aa13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 PPIFP30405 207 aaKnown RBP13.07□□□□□ -0.32
PCDHA6-203ENST00000529310 J3QRE1 110 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 TNFSF13O75888 250 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 MDC1Q14676 2089 aaKnown RBP13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 FAM90A9PA6NNJ1 464 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 CXCL1P09341 107 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 MALP21145 153 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 EVI2AP22794 236 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 FAM57AQ8TBR7 257 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 C7orf69Q9H7B7 122 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 IGKV1D-8A0A087WSZ0 117 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 A0A0A6YYD4 124 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 AMBPP02760 352 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 DUTP33316 252 aaKnown RBP13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 TMEM133Q9H2Q1 129 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 SEPSECSQ9HD40 501 aaKnown RBP13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 PTPRFP10586 1907 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 ZNF124Q15973 351 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 SAMD5Q5TGI4 173 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 TMEM167AQ8TBQ9 72 aa13.06□□□□□ -0.32
PCDHA6-203ENST00000529310 HEATR5BQ9P2D3 2071 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 GZMBP10144 247 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 MS4A6AQ9H2W1 248 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 ERVK11-1P61568 191 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 LRRC37A2A6NM11 1700 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 SMAD7O15105 426 aaKnown RBP13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 HTN3P15516 51 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 C9orf106Q8NAJ2 232 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 FAM168AQ92567 244 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 GFI1Q99684 422 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 ARID2Q68CP9 1835 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 F2Z2F3 143 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 LYPD3O95274 346 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 TIMP3P35625 211 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 FOXL1Q12952 345 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 GAGE13Q4V321 117 aa13.05□□□□□ -0.32
PCDHA6-203ENST00000529310 A6NNC1 897 aa13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 SRSF6Q13247 344 aaKnown RBP13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 ZNF319Q9P2F9 582 aa13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 CD28P10747 220 aa13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 LHX2P50458 406 aa13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 MRPL14Q6P1L8 145 aaKnown RBP13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 PIKFYVEQ9Y2I7 2098 aa13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 SMPXQ9UHP9 88 aa13.04□□□□□ -0.32
PCDHA6-203ENST00000529310 RHOGP84095 191 aa13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 PRB3Q04118 309 aaPredicted RBP13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 C8orf46Q8TAG6 207 aa13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 TFF1P04155 84 aa13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 CD300EQ496F6 205 aaPredicted RBP13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 COLCA1Q6ZS62 124 aa13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 OR9G4Q8NGQ1 327 aa13.03□□□□□ -0.32
PCDHA6-203ENST00000529310 TRAV5A0A0B4J249 113 aa13.02□□□□□ -0.32
PCDHA6-203ENST00000529310 CD59P13987 128 aa13.02□□□□□ -0.33
PCDHA6-203ENST00000529310 STHQ8IWL8 128 aa13.02□□□□□ -0.33
PCDHA6-203ENST00000529310 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
PCDHA6-203ENST00000529310 CD24P25063 80 aa13.02□□□□□ -0.33
PCDHA6-203ENST00000529310 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.33
PCDHA6-203ENST00000529310 ATXN8Q156A1 80 aa13.02□□□□□ -0.33
PCDHA6-203ENST00000529310 OTOFQ9HC10 1997 aa13.02□□□□□ -0.33
PCDHA6-203ENST00000529310 GVINP1Q7Z2Y8 2422 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 GGTLC3B5MD39 225 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 SLC25A48Q6ZT89 311 aaKnown RBP13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 IGLV3-12A0A075B6K2 115 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 A0A1B0GW64 132 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 LINC01549A6NIU2 74 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 NPIPB5A8MRT5 1133 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 LINC01559Q495D7 138 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 GGTLC1Q9BX51 225 aa13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 TDRD6O60522 2096 aaKnown RBP13.01□□□□□ -0.33
PCDHA6-203ENST00000529310 A0A1W2PRX2 142 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 C1orf194Q5T5A4 169 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 TRGV11A0A075B6L2 103 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 IGLV3-32A0A0A0MS00 114 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 A0A0U1RRA0 63 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 M0R2P5 195 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 LAGE3Q14657 143 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 OR10W1Q8NGF6 305 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 NDUFS8O00217 210 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 CRIM1Q9NZV1 1036 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 SRSF4Q08170 494 aaKnown RBP13□□□□□ -0.33
PCDHA6-203ENST00000529310 SRSF7Q16629 238 aaKnown RBP eCLIP13□□□□□ -0.33
PCDHA6-203ENST00000529310 LHFPL1Q86WI0 220 aa13□□□□□ -0.33
PCDHA6-203ENST00000529310 OVOL1O14753 267 aa12.99□□□□□ -0.33
PCDHA6-203ENST00000529310 GTSCR1Q86UQ5 136 aa12.99□□□□□ -0.33
PCDHA6-203ENST00000529310 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
PCDHA6-203ENST00000529310 IGKV1-12A0A0C4DH73 117 aa12.99□□□□□ -0.33
PCDHA6-203ENST00000529310 IGKV1D-12P01611 117 aa12.99□□□□□ -0.33
PCDHA6-203ENST00000529310 CDKN1AP38936 164 aa12.99□□□□□ -0.33
PCDHA6-203ENST00000529310 ESPL1Q14674 2120 aa12.99□□□□□ -0.33
PCDHA6-203ENST00000529310 RALGAPA2Q2PPJ7 1873 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms