RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 DNAH17Q9UFH2 4485 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 ZNF705FA8MVS1 300 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-212ENST00000529205 FAM90A26D6RGX4 464 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 GSTZ1O43708 216 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-212ENST00000529205 ZNF705DP0CH99 300 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-212ENST00000529205 ZNF705BP0CI00 300 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-212ENST00000529205 RNASE2P10153 161 aaKnown RBP9.62□□□□□ -0.87
HIF3A-212ENST00000529205 ETV6P41212 452 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 UCP3P55916 312 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 OXA1LQ15070 435 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 TIGITQ495A1 244 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 UBE2NLQ5JXB2 153 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 OR1S2Q8NGQ3 325 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 GLMPQ8WWB7 406 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 DKK2Q9UBU2 259 aa9.62□□□□□ -0.87
HIF3A-212ENST00000529205 HLA-DRB4P13762 266 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 NKX2-1P43699 371 aaPredicted RBP9.61□□□□□ -0.87
HIF3A-212ENST00000529205 LSM3P62310 102 aaKnown RBP9.61□□□□□ -0.87
HIF3A-212ENST00000529205 CTF1Q16619 201 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 MLANAQ16655 118 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 SIGLEC15Q6ZMC9 328 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 LYSMD2Q8IV50 215 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 C15orf53Q8NAA6 179 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 FNDC4Q9H6D8 234 aaPredicted RBP9.61□□□□□ -0.87
HIF3A-212ENST00000529205 PFDN2Q9UHV9 154 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 GOLT1BQ9Y3E0 138 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 U3KQE9 123 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 HLA-DRB4X5D2U9 266 aa9.61□□□□□ -0.87
HIF3A-212ENST00000529205 IGKV1-17P01599 117 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 IGKV3-20P01619 116 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 HBE1P02100 147 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 SLC25A4P12235 298 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 PGAM2P15259 253 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 ID1P41134 155 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
HIF3A-212ENST00000529205 NCS1P62166 190 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 IZUMO4Q1ZYL8 232 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 GSG1LQ6UXU4 331 aa9.6□□□□□ -0.87
HIF3A-212ENST00000529205 RNASE11Q8TAA1 199 aaKnown RBP9.6□□□□□ -0.87
HIF3A-212ENST00000529205 RRNAD1Q96FB5 475 aaKnown RBP9.6□□□□□ -0.87
HIF3A-212ENST00000529205 C7orf50Q9BRJ6 194 aaKnown RBP9.6□□□□□ -0.87
HIF3A-212ENST00000529205 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
HIF3A-212ENST00000529205 MRPL36Q9P0J6 103 aaKnown RBP9.6□□□□□ -0.87
HIF3A-212ENST00000529205 PKD1P98161 4303 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 A0A0B4J293 547 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 SMIM31A0A1B0GVY4 71 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 IL4P05112 153 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 OR10J1P30954 320 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 NUP62P37198 522 aaPredicted RBP9.59□□□□□ -0.87
HIF3A-212ENST00000529205 HTR2BP41595 481 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 DAD1P61803 113 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 DHODHQ02127 395 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 TNP2Q05952 138 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 TRIM16LQ309B1 348 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 GPR107Q5VW38 600 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 ETFRF1Q6IPR1 90 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 TMEM88Q6PEY1 159 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 Q8N1X5 172 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 SAMD12Q8N8I0 201 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 ZNF486Q96H40 463 aaPredicted RBP9.59□□□□□ -0.87
HIF3A-212ENST00000529205 AGRNO00468 2067 aa9.59□□□□□ -0.87
HIF3A-212ENST00000529205 BUB3O43684 328 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 GABARAPO95166 117 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 IGKV1-5P01602 117 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 IGLC1P0CG04 106 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 FXYD7P58549 80 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 SPATA31B1PQ5VZV4 182 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 C6orf223Q8N319 242 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 OR4B1Q8NGF8 309 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 COQ8AQ8NI60 647 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 LINC00052Q96N35 136 aa9.58□□□□□ -0.88
HIF3A-212ENST00000529205 YTHDF2Q9Y5A9 579 aaKnown RBP9.58□□□□□ -0.88
HIF3A-212ENST00000529205 C3orf85A0A1B0GTC6 90 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 LOC102723971A0A1B0GUV8 181 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 RD3LP0DJH9 198 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 RCVRNP35243 200 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 RPS19P39019 145 aaKnown RBP9.57□□□□□ -0.88
HIF3A-212ENST00000529205 RND2P52198 227 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 PIGPP57054 158 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 RND3P61587 244 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 VBP1P61758 197 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 USF2Q15853 346 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-212ENST00000529205 FOXI2Q6ZQN5 318 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 RNASEH2CQ8TDP1 164 aaKnown RBP9.57□□□□□ -0.88
HIF3A-212ENST00000529205 GPX8Q8TED1 209 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 CLUHP3Q96NS8 147 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-212ENST00000529205 SCPEP1Q9HB40 452 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
HIF3A-212ENST00000529205 HEYLQ9NQ87 328 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-212ENST00000529205 NBDYA0A0U1RRE5 68 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 SPCS3P61009 180 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 SPCS2Q15005 226 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 BSXQ3C1V8 233 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 EBLN2Q6P2I7 272 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 PRSS54Q6PEW0 395 aa9.56□□□□□ -0.88
HIF3A-212ENST00000529205 NOXA1Q86UR1 476 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms