RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 A0A1W2PRM7 423 aa11.72□□□□□ -0.53
ECHDC1-220ENST00000528402 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
ECHDC1-220ENST00000528402 PFN1P07737 140 aaKnown RBP11.72□□□□□ -0.53
ECHDC1-220ENST00000528402 CX3CL1P78423 397 aa11.72□□□□□ -0.53
ECHDC1-220ENST00000528402 ARPC1AQ92747 370 aa11.72□□□□□ -0.53
ECHDC1-220ENST00000528402 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
ECHDC1-220ENST00000528402 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 HELTA6NFD8 242 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 NPFFO15130 113 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 HIST1H1BP16401 226 aaKnown RBP11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 GALR1P47211 349 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 ATP5J2P56134 94 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 UBE2L3P68036 154 aaKnown RBP11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 LINC00305Q7Z4B0 112 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 URGCP-MRPS24S4R325 110 aa11.71□□□□□ -0.53
ECHDC1-220ENST00000528402 NAV3Q8IVL0 2385 aa11.71□□□□□ -0.54
ECHDC1-220ENST00000528402 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 HLA-DRB1P01911 266 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 CXCL1P09341 107 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 TAS2R60P59551 318 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 KIAA0141Q14154 515 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 OR1B1Q8NGR6 318 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 SAV1Q9H4B6 383 aaPredicted RBP11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 DMRT1Q9Y5R6 373 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 KALRNO60229 2985 aa11.7□□□□□ -0.54
ECHDC1-220ENST00000528402 TGIF2-C20orf24A0A0A6YYL0 155 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 K7EIM0 57 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 IGHV3-48P01763 117 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 ORM2P19652 201 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 S100A7P31151 101 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 SAA4P35542 130 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 MFAP4P55083 255 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 SUMO1P63165 101 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 FOXL1Q12952 345 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 KLK9Q2XQG4 91 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 ZFP82Q8N141 532 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 Q8N9W7 124 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 AJUBAQ96IF1 538 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 TXN2Q99757 166 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 SRD5A3Q9H8P0 318 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 KLK9Q9UKQ9 250 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 HIGD1AQ9Y241 93 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 ZZEF1O43149 2961 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 ITPR1Q14643 2758 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 IGLV11-55A0A075B6I3 123 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 TRAV9-1A0A075B6T8 112 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 CENPVL3A0A0U1RRI6 287 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 C5orf52A6NGY3 159 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 GGCTO75223 188 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 S100A9P06702 114 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 RD3LP0DJH9 198 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 APELAP0DMC3 54 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 CD24P25063 80 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 RPL35P42766 123 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 RBM14Q96PK6 669 aaKnown RBP11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 TMEM14CQ9P0S9 112 aa11.69□□□□□ -0.54
ECHDC1-220ENST00000528402 TRAV5A0A0B4J249 113 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 AP4M1O00189 453 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 TOMM40O96008 361 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 OR10J4P0C629 311 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 PSG1P11464 419 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 GATA3P23771 443 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 CRYBB3P26998 211 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 FCGR2BP31994 310 aaPredicted RBP11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 GNG4P50150 75 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 TIGITQ495A1 244 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 C2CD4CQ8TF44 421 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 FXYD5Q96DB9 178 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 DERL1Q9BUN8 251 aa11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
ECHDC1-220ENST00000528402 IGHV7-81A0A0B4J1V7 117 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 IGHV1-69DA0A0B4J2H0 117 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 IGHV4-61A0A0C4DH41 118 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 PPP5D1E7EU14 171 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 UBE2CO00762 179 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 IGHV1-69P01742 117 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 TYMSP04818 313 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 COX6B1P14854 86 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 SLC25A16P16260 332 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 FAM3BP58499 235 aaPredicted RBP11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 ZNF843Q8N446 348 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 FANCD2OSQ96PS1 177 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 MEGF9Q9H1U4 602 aa11.67□□□□□ -0.54
ECHDC1-220ENST00000528402 WNK2Q9Y3S1 2297 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 GGTLC3B5MD39 225 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 IGKV1-17P01599 117 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 NBEAP1P0C6P0 100 aa11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 CNN1P51911 297 aaKnown RBP11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 SNRPEP62304 92 aaKnown RBP11.66□□□□□ -0.54
ECHDC1-220ENST00000528402 RPL19P84098 196 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms