RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 DHRS2Q13268 280 aa11.26□□□□□ -0.61
CLNS1A-210ENST00000528364 AARDQ4LEZ3 155 aa11.26□□□□□ -0.61
CLNS1A-210ENST00000528364 OR52E5Q8NH55 327 aa11.26□□□□□ -0.61
CLNS1A-210ENST00000528364 GRAMD2BQ96HH9 432 aa11.26□□□□□ -0.61
CLNS1A-210ENST00000528364 NAA60Q9H7X0 242 aa11.26□□□□□ -0.61
CLNS1A-210ENST00000528364 PRR13Q9NZ81 148 aa11.26□□□□□ -0.61
CLNS1A-210ENST00000528364 X6R8D5 127 aa11.26□□□□□ -0.61
CLNS1A-210ENST00000528364 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 CEBPZOSA8MTT3 80 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 GABARAPH6UMI1 98 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 RGS5O15539 181 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 HTR2BP41595 481 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 SPCS2Q15005 226 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 C2orf83Q53S99 150 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 TMEM268Q5VZI3 342 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 C16orf54Q6UWD8 224 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 FAM219AQ8IW50 185 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 Q8WTZ3 238 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 RBPMSQ93062 196 aaKnown RBP11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 RAB40CQ96S21 281 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 C14orf166Q9Y224 244 aaKnown RBP11.25□□□□□ -0.61
CLNS1A-210ENST00000528364 RPS10-NUDT3A0A1W2PQS6 291 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 B3GALNT1O75752 331 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 OR10J1P30954 320 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 USF2Q15853 346 aaPredicted RBP11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 CSNK1G2-AS1Q8NCQ2 148 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 OR4C16Q8NGL9 310 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 C15orf40Q8WUR7 153 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 NPIPB3Q92617 1050 aa11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 NARS2Q96I59 477 aaKnown RBP11.24□□□□□ -0.61
CLNS1A-210ENST00000528364 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
CLNS1A-210ENST00000528364 DISC1C4P0D8 188 aa11.23□□□□□ -0.61
CLNS1A-210ENST00000528364 SPP1P10451 314 aa11.23□□□□□ -0.61
CLNS1A-210ENST00000528364 YPEL3P61236 119 aaPredicted RBP11.23□□□□□ -0.61
CLNS1A-210ENST00000528364 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
CLNS1A-210ENST00000528364 SLC24A4Q8NFF2 622 aa11.23□□□□□ -0.61
CLNS1A-210ENST00000528364 ZNF705EA8MWA4 302 aaPredicted RBP11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 SCGB2A1O75556 95 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 IL4P05112 153 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 SLC25A4P12235 298 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 SSBP1Q04837 148 aaKnown RBP11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 GSG1LQ6UXU4 331 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 Q6ZTC4 211 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 ZNF767PQ75MW2 155 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 OR51S1Q8NGJ8 323 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 SMIM4Q8WVI0 70 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 HRH4Q9H3N8 390 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 TBC1D24Q9ULP9 559 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 TMEM56-RWDD3S4R434 201 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 HERC2O95714 4834 aa11.22□□□□□ -0.61
CLNS1A-210ENST00000528364 DNAH6Q9C0G6 4158 aa11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 HELTA6NFD8 242 aa11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 AKAIN1P0CW23 69 aa11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 MIFP14174 115 aa11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 DEFB1P60022 68 aa11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 SURF2Q15527 256 aaPredicted RBP11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 DIRAS2Q96HU8 199 aa11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 CELA1Q9UNI1 258 aa11.21□□□□□ -0.61
CLNS1A-210ENST00000528364 C11orf94C9JXX5 98 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 FAM90A26D6RGX4 464 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 BUB3O43684 328 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 RD3LP0DJH9 198 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 NPY1RP25929 384 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 ALDH3B2P48448 385 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 MRPS10P82664 201 aaKnown RBP11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 IL18Q14116 193 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 TMEM41BQ5BJD5 291 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 CLVS1Q8IUQ0 354 aaPredicted RBP11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 OR51G1Q8NGK1 321 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 SCRT1Q9BWW7 348 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 XCL2Q9UBD3 114 aa11.2□□□□□ -0.62
CLNS1A-210ENST00000528364 TOMM40O96008 361 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 IFNA10P01566 189 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 SULT1A3P0DMM9 295 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 SULT1A4P0DMN0 295 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 PSG1P11464 419 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 EIF2B2P49770 351 aaKnown RBP11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 AP2S1P53680 142 aaPredicted RBP11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 TCTAP57738 103 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 NMSQ5H8A3 153 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 LYZL2Q7Z4W2 148 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 GPR141Q7Z602 305 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 RBKSQ9H477 322 aa11.19□□□□□ -0.62
CLNS1A-210ENST00000528364 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
CLNS1A-210ENST00000528364 TRAV10A0A0B4J240 114 aa11.18□□□□□ -0.62
CLNS1A-210ENST00000528364 H3BMM0 161 aa11.18□□□□□ -0.62
CLNS1A-210ENST00000528364 CTDSPLO15194 276 aa11.18□□□□□ -0.62
CLNS1A-210ENST00000528364 AKR1C4P17516 323 aa11.18□□□□□ -0.62
CLNS1A-210ENST00000528364 ETFRF1Q6IPR1 90 aa11.18□□□□□ -0.62
CLNS1A-210ENST00000528364 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms