RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 RNASEH2CQ8TDP1 164 aaKnown RBP7.73□□□□□ -1.17
CPSF1-203ENST00000527916 GPR146Q96CH1 333 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 TMEM231Q9H6L2 316 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
CPSF1-203ENST00000527916 PIGBOS1A0A0B4J2F0 54 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 A0A1B0GU03 582 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 A0A1W2PS18 150 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 DFFBO76075 338 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 SLC25A4P12235 298 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 OPRK1P41145 380 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 NANOS2P60321 138 aaKnown RBP7.72□□□□□ -1.17
CPSF1-203ENST00000527916 TMEM187Q14656 261 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 MLANAQ16655 118 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 NMSQ5H8A3 153 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 TMEM268Q5VZI3 342 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 TCF24Q7RTU0 167 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 NOXA1Q86UR1 476 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 MCFD2Q8NI22 146 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 DEDD2Q8WXF8 326 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 TMEM230Q96A57 120 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 HEYLQ9NQ87 328 aaPredicted RBP7.72□□□□□ -1.17
CPSF1-203ENST00000527916 PLA2G2EQ9NZK7 142 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 CACNG5Q9UF02 275 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
CPSF1-203ENST00000527916 IGHV3-49A0A0A0MS15 119 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 PRSS29PA6NIE9 313 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 IGKV1-17P01599 117 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 APOHP02749 345 aaPredicted RBP7.71□□□□□ -1.18
CPSF1-203ENST00000527916 CRYBB3P26998 211 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 ATP5IP56385 69 aaPredicted RBP7.71□□□□□ -1.18
CPSF1-203ENST00000527916 ETFRF1Q6IPR1 90 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 APRG1Q8IVJ8 170 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 LILRB2Q8N423 598 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 ST8SIA2Q92186 375 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 CSTL1Q9H114 145 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.18
CPSF1-203ENST00000527916 MRPL36Q9P0J6 103 aaKnown RBP7.71□□□□□ -1.18
CPSF1-203ENST00000527916 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
CPSF1-203ENST00000527916 A0A0B4J2A0 478 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 IGLL5B9A064 214 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 DNASE2O00115 360 aaPredicted RBP7.7□□□□□ -1.18
CPSF1-203ENST00000527916 SULT1A3P0DMM9 295 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 SULT1A4P0DMN0 295 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 RPL35AP18077 110 aaKnown RBP7.7□□□□□ -1.18
CPSF1-203ENST00000527916 FAUP35544 74 aaKnown RBP7.7□□□□□ -1.18
CPSF1-203ENST00000527916 CCR6P51684 374 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 AP3S2P59780 193 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 YPEL3P61236 119 aaPredicted RBP7.7□□□□□ -1.18
CPSF1-203ENST00000527916 SUPT4H1P63272 117 aaKnown RBP7.7□□□□□ -1.18
CPSF1-203ENST00000527916 SRPXP78539 464 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 GBGT1Q8N5D6 347 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 SLC24A4Q8NFF2 622 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 Q8WTZ3 238 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 METTL26Q96S19 204 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 RARRES2Q99969 163 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 C11orf68Q9H3H3 251 aaKnown RBP7.7□□□□□ -1.18
CPSF1-203ENST00000527916 MCUBQ9NWR8 336 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 HSPB7Q9UBY9 170 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 SHPKQ9UHJ6 478 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 U3KQ87 197 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 U3KQE9 123 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 DNAH11Q96DT5 4516 aa7.7□□□□□ -1.18
CPSF1-203ENST00000527916 IGKV3-7A0A075B6H7 116 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 IGHV3OR16-13A0A075B7E8 117 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 IGHV3-74A0A0B4J1X5 117 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 DUXBA0A1W2PPF3 345 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 CEBPZOSA8MTT3 80 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 MPTX1A8MV57 137 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 C11orf94C9JXX5 98 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 IGLC1P0CG04 106 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 ANXA3P12429 323 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 AKR1C4P17516 323 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 TFPI2P48307 235 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 KLF9Q13886 244 aaPredicted RBP7.69□□□□□ -1.18
CPSF1-203ENST00000527916 SMCO1Q147U7 214 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 TMEM128Q5BJH2 165 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 PRSS54Q6PEW0 395 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 LGI3Q8N145 548 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 OR1S2Q8NGQ3 325 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 TMEM170AQ8WVE7 144 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 GRAMD2BQ96HH9 432 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 NARS2Q96I59 477 aaKnown RBP7.69□□□□□ -1.18
CPSF1-203ENST00000527916 SLC25A21Q9BQT8 299 aaPredicted RBP7.69□□□□□ -1.18
CPSF1-203ENST00000527916 KRTAP4-5Q9BYR2 181 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 APLNQ9ULZ1 77 aa7.69□□□□□ -1.18
CPSF1-203ENST00000527916 K7EQG2 157 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 NPY1RP25929 384 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 P2RY1P47900 373 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 RND2P52198 227 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 AP2S1P53680 142 aaPredicted RBP7.68□□□□□ -1.18
CPSF1-203ENST00000527916 RPL11P62913 178 aaKnown RBP7.68□□□□□ -1.18
CPSF1-203ENST00000527916 ZNF124Q15973 351 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 TIGITQ495A1 244 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 LYZL2Q7Z4W2 148 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 TOMM5Q8N4H5 51 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 LRTM2Q8N967 370 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 TRIM63Q969Q1 353 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 PKD1P98161 4303 aa7.68□□□□□ -1.18
CPSF1-203ENST00000527916 IGHV3-66A0A0C4DH42 116 aa7.67□□□□□ -1.18
CPSF1-203ENST00000527916 ZNF701M0R085 212 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms