RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 C1QL4Q86Z23 238 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 OR9G4Q8NGQ1 327 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 MBD2Q9UBB5 411 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 NOTCH3Q9UM47 2321 aa8.18□□□□□ -1.1
NEDD8-205ENST00000527046 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 RPS10-NUDT3A0A1W2PQS6 291 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 TMEM213A2RRL7 107 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 G3V4G9 280 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 NDUFA4O00483 81 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 GNG7O60262 68 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 SULT1A1P50225 295 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 YPEL3P61236 119 aaPredicted RBP8.17□□□□□ -1.1
NEDD8-205ENST00000527046 RPP30P78346 268 aaKnown RBP8.17□□□□□ -1.1
NEDD8-205ENST00000527046 DLK1P80370 383 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 ZNF90Q03938 601 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 OR8G2PQ6IF36 304 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 ETFRF1Q6IPR1 90 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 TOMM20LQ6UXN7 152 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 STPG3Q8N7X2 389 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 TMEM190Q8WZ59 177 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 ACY3Q96HD9 319 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 ST6GAL2Q96JF0 529 aa8.17□□□□□ -1.1
NEDD8-205ENST00000527046 PAIP2BQ9ULR5 123 aaKnown RBP8.17□□□□□ -1.1
NEDD8-205ENST00000527046 LSM4Q9Y4Z0 139 aaKnown RBP8.17□□□□□ -1.1
NEDD8-205ENST00000527046 TRAV30A0A087WSZ9 112 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 C2orf70A6NJV1 201 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 A8MWP6 167 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 SMLR1H3BR10 107 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 L7N2F9 121 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 SCAF4O95104 1147 aaKnown RBP8.16□□□□□ -1.1
NEDD8-205ENST00000527046 CD33P20138 364 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 OR10J1P30954 320 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 CAV2P51636 162 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 VAMP2P63027 116 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 KPRPQ5T749 579 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-205ENST00000527046 TMEM144Q7Z5S9 345 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 OR11H4Q8NGC9 324 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 OR1S2Q8NGQ3 325 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 TRGV9Q99603 122 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 WFDC1Q9HC57 220 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 GAR1Q9NY12 217 aaKnown RBP8.16□□□□□ -1.1
NEDD8-205ENST00000527046 SIGLEC8Q9NYZ4 499 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 U3KQE9 123 aa8.16□□□□□ -1.1
NEDD8-205ENST00000527046 WI2-2373I1.2A0A1W2PRP0 233 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 K7EMT4 169 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 NUPL2O15504 423 aaKnown RBP8.15□□□□□ -1.1
NEDD8-205ENST00000527046 APOHP02749 345 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-205ENST00000527046 RLN2P04090 185 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 PSG1P11464 419 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 PVALBP20472 110 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-205ENST00000527046 CBLN1P23435 193 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 GATA2P23769 480 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-205ENST00000527046 BCAP31P51572 246 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 RAP2BP61225 183 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 EWSR1Q01844 656 aaKnown RBP eCLIP8.15□□□□□ -1.1
NEDD8-205ENST00000527046 EGFEM1PQ0D2K5 195 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 BEAN1Q3B7T3 259 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 FAM106AQ4KMX7 169 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 ZNF600Q6ZNG1 722 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 TMEM217Q8N7C4 229 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 ASB13Q8WXK3 278 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 GGACTQ9BVM4 153 aa8.15□□□□□ -1.1
NEDD8-205ENST00000527046 PUS1Q9Y606 427 aaKnown RBP eCLIP8.15□□□□□ -1.1
NEDD8-205ENST00000527046 ZNF320A2RRD8 509 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 RNF222A6NCQ9 220 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 SEC14L6B5MCN3 397 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 ZNF207O43670 478 aaKnown RBP8.14□□□□□ -1.11
NEDD8-205ENST00000527046 TOMM40O96008 361 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 IGLV1-51P01701 117 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 LINC00869P0C866 280 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 FOLR2P14207 255 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 S100A11P31949 105 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-205ENST00000527046 CD300CQ08708 224 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 SLC38A11Q08AI6 406 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 USF2Q15853 346 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-205ENST00000527046 DEFB114Q30KQ6 69 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 OR2T35Q8NGX2 323 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 NPVFQ9HCQ7 196 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 MLXQ9UH92 298 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 HSPB11Q9Y547 144 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
NEDD8-205ENST00000527046 MGAM2Q2M2H8 2515 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 IZUMO1RA6ND01 250 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 RD3LP0DJH9 198 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
NEDD8-205ENST00000527046 PATE2Q6UY27 113 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 OR5C1Q8NGR4 320 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 MGST2Q99735 147 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 SLC45A2Q9UMX9 530 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 TNFSF18Q9UNG2 199 aa8.13□□□□□ -1.11
NEDD8-205ENST00000527046 hCG_2014768A0A024R1R8 64 aa8.12□□□□□ -1.11
NEDD8-205ENST00000527046 ZFP92A6NM28 416 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms