RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
CAPN1-204ENST00000526468 Q6ZS49 121 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 HAPLN4Q86UW8 402 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 FAM219AQ8IW50 185 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 OR52L2PQ8NGH6 319 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 FAM213BQ8TBF2 198 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 DLX4Q92988 240 aaPredicted RBP9.07□□□□□ -0.96
CAPN1-204ENST00000526468 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 CYYR1Q96J86 154 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 NABP2Q9BQ15 211 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 NICN1Q9BSH3 213 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 ANXA10Q9UJ72 324 aa9.07□□□□□ -0.96
CAPN1-204ENST00000526468 FOXA2Q9Y261 457 aaPredicted RBP9.07□□□□□ -0.96
CAPN1-204ENST00000526468 LSM5Q9Y4Y9 91 aaKnown RBP9.07□□□□□ -0.96
CAPN1-204ENST00000526468 PUS1Q9Y606 427 aaKnown RBP eCLIP9.07□□□□□ -0.96
CAPN1-204ENST00000526468 LCE6AA0A183 80 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 IGHV3-11P01762 117 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
CAPN1-204ENST00000526468 HERV-K104P61576 105 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 NUTF2P61970 127 aaKnown RBP9.06□□□□□ -0.96
CAPN1-204ENST00000526468 RPL19P84098 196 aaKnown RBP9.06□□□□□ -0.96
CAPN1-204ENST00000526468 SERF2P84101 59 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 MORN2Q502X0 79 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 ZNF833PQ6ZTB9 187 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 ODF3L1Q8IXM7 274 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 GAPTQ8N292 157 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 OR2C3Q8N628 320 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 ISOC2Q96AB3 205 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 RITA1Q96K30 269 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 Q96M66 194 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 NEU1Q99519 415 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 RSRP1Q9BUV0 290 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 KCNK15Q9H427 330 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 LYRM2Q9NU23 88 aaPredicted RBP9.06□□□□□ -0.96
CAPN1-204ENST00000526468 FBXO7Q9Y3I1 522 aa9.06□□□□□ -0.96
CAPN1-204ENST00000526468 A0A1B0GU03 582 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 C9JQL5 133 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 TCAPO15273 167 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 PDCD6O75340 191 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 NDUFA3O95167 84 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 IFNA5P01569 189 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 CTXN2P0C2S0 81 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 TPPP2P59282 170 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 EWSR1Q01844 656 aaKnown RBP eCLIP9.05□□□□□ -0.96
CAPN1-204ENST00000526468 TMEM187Q14656 261 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 ACSM6Q6P461 480 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 KCNIP4Q6PIL6 250 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 OR2G3Q8NGZ4 309 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 MRPL30Q8TCC3 161 aaKnown RBP9.05□□□□□ -0.96
CAPN1-204ENST00000526468 IL1F10Q8WWZ1 152 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 ANAPC16Q96DE5 110 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 ARHGAP5-AS1Q96IT6 56 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 OR4C12Q96R67 309 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 IMMP2LQ96T52 175 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 ZNF2Q9BSG1 426 aaPredicted RBP9.05□□□□□ -0.96
CAPN1-204ENST00000526468 PECRQ9BY49 303 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 IFI27L2Q9H2X8 130 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
CAPN1-204ENST00000526468 MBNL3Q9NUK0 354 aaKnown RBP9.05□□□□□ -0.96
CAPN1-204ENST00000526468 LOC102723971A0A1B0GUV8 181 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 A8MWP6 167 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 TMEM250H0YL14 139 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 M0R143 59 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 CYB5BO43169 146 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 FUT3P21217 361 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 NKX2-1P43699 371 aaPredicted RBP9.04□□□□□ -0.96
CAPN1-204ENST00000526468 PIGPP57054 158 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 USF2Q15853 346 aaPredicted RBP9.04□□□□□ -0.96
CAPN1-204ENST00000526468 C19orf54Q5BKX5 351 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 PLAC9Q5JTB6 97 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 FAM71F2Q6NXP2 309 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 C5orf24Q7Z6I8 188 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 NPBQ8NG41 125 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 OR4D5Q8NGN0 318 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 Q8WTZ3 238 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 MOB3AQ96BX8 217 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 RAB40CQ96S21 281 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 ATP5SQ99766 215 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 FAM103A1Q9BTL3 118 aaKnown RBP9.04□□□□□ -0.96
CAPN1-204ENST00000526468 Q9N2K0 584 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 HYDINQ4G0P3 5121 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 ALMS1Q8TCU4 4167 aa9.04□□□□□ -0.96
CAPN1-204ENST00000526468 TRAV9-1A0A075B6T8 112 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 RRHO14718 337 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 YIF1AO95070 293 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 DIRAS3O95661 229 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 SCGB1D2O95969 90 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 MBP02144 154 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 TYMSP04818 313 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 OR13C7P0DN81 318 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 BCL2P10415 239 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 CRIP2P52943 208 aaPredicted RBP9.03□□□□□ -0.96
CAPN1-204ENST00000526468 HBG1P69891 147 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 HBG2P69892 147 aa9.03□□□□□ -0.96
CAPN1-204ENST00000526468 HTD2P86397 168 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms