RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 IFNA10P01566 189 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 MED14OSP0DP75 135 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 SUB1P53999 127 aaKnown RBP eCLIP8.24□□□□□ -1.098e-8■■■■□ 26.6
NEDD8-204ENST00000526430 ATP5IP56385 69 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-204ENST00000526430 TAS2R30P59541 319 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 RRAS2P62070 204 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-204ENST00000526430 ZNF616Q08AN1 781 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 RPP25LQ8N5L8 163 aaKnown RBP8.24□□□□□ -1.09
NEDD8-204ENST00000526430 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
NEDD8-204ENST00000526430 DCUN1D4Q92564 292 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 PINX1Q96BK5 328 aaKnown RBP8.24□□□□□ -1.09
NEDD8-204ENST00000526430 CXorf58Q96LI9 332 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 RAB40CQ96S21 281 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 RANGRFQ9HD47 186 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-204ENST00000526430 ENY2Q9NPA8 101 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 C21orf62Q9NYP8 219 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 PSENENQ9NZ42 101 aa8.24□□□□□ -1.09
NEDD8-204ENST00000526430 IGKV1D-37A0A075B6S9 117 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 TRAV14DV4A0A0A6YYC5 116 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 FAM24AA6NFZ4 105 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 LINC01619G3V211 115 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 H3BP45 60 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 SSSCA1O60232 199 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 SAP30O75446 220 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 DEDDO75618 318 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 SCGB1D2O95969 90 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 EDN2P20800 178 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 SPANXN5Q5MJ07 72 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 PPP1R1CQ8WVI7 109 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 EEF1AKMT3Q96AZ1 226 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 CIB3Q96Q77 187 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-204ENST00000526430 ATP6V0BQ99437 205 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 TXN2Q99757 166 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 MED28Q9H204 178 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 ZC4H2Q9NQZ6 224 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 OR5AC2Q9NZP5 309 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 THYN1Q9P016 225 aa8.23□□□□□ -1.09
NEDD8-204ENST00000526430 LSM5Q9Y4Y9 91 aaKnown RBP8.23□□□□□ -1.09
NEDD8-204ENST00000526430 IGKV1OR2-108A0A075B7D4 117 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 OR2T8A6NH00 312 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 OVOL1O14753 267 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 TGOLN2O43493 480 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 TSC22D2O75157 780 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 MPC2O95563 127 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 IGKV1-17P01599 117 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 GPR183P32249 361 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 GPX4P36969 197 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-204ENST00000526430 GAMTQ14353 236 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 ACSM6Q6P461 480 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 GPHB5Q86YW7 130 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 TMEM116Q8NCL8 245 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 OR4X1Q8NH49 305 aa8.22□□□□□ -1.09
NEDD8-204ENST00000526430 BSCL2Q96G97 398 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-204ENST00000526430 A0A1B0GVG6 124 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 CORTO00230 105 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 CLN5O75503 358 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 ARL3P36405 182 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 OPRK1P41145 380 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 MFAP4P55083 255 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 CYCSP99999 105 aaKnown RBP8.21□□□□□ -1.1
NEDD8-204ENST00000526430 UNQ9165/PRO28630Q6UXU0 137 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
NEDD8-204ENST00000526430 ZNF436Q9C0F3 470 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-204ENST00000526430 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
NEDD8-204ENST00000526430 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
NEDD8-204ENST00000526430 IFNA4P05014 189 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 CSN3P07498 182 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 METTL15P1P0C7V9 234 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 RND2P52198 227 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 SYNJ2BPP57105 145 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 LRRC37A5PQ49AS3 106 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 FAM209BQ5JX69 171 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 TMEM182Q6ZP80 229 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-204ENST00000526430 SLC16A13Q7RTY0 426 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 CACNG8Q8WXS5 425 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 NPIPB3Q92617 1050 aa8.2□□□□□ -1.1
NEDD8-204ENST00000526430 LYRM2Q9NU23 88 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-204ENST00000526430 LGALS9O00182 355 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 CYB5BO43169 146 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 SLC25A4P12235 298 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 ZP3P21754 424 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 S100A10P60903 97 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 NHLH2Q02577 135 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 TIGITQ495A1 244 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 Q56UQ5 140 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 SPSB3Q6PJ21 355 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 NOXA1Q86UR1 476 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 THAP8Q8NA92 274 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 UBAC2Q8NBM4 344 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 VPS13DQ5THJ4 4388 aa8.19□□□□□ -1.1
NEDD8-204ENST00000526430 DNAH6Q9C0G6 4158 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 NUPR2A6NF83 97 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 E5RGE8 158 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 CST7O76096 145 aa8.18□□□□□ -1.1
NEDD8-204ENST00000526430 GIPP09681 153 aaPredicted RBP8.18□□□□□ -1.1
NEDD8-204ENST00000526430 C8orf88P0DMB2 117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms