RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PAFAH1B2P68402 229 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 USF2Q15853 346 aaPredicted RBP8.82□□□□□ -1
SSBP3-210ENST00000525990 NMSQ5H8A3 153 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 GSG1LQ6UXU4 331 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 LINC00476Q8WZB0 136 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 METTL26Q96S19 204 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 BCL7BQ9BQE9 202 aa8.82□□□□□ -1
SSBP3-210ENST00000525990 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
SSBP3-210ENST00000525990 KNCNA6PVL3 124 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 GIG44P09565 113 aaPredicted RBP8.81□□□□□ -1
SSBP3-210ENST00000525990 NPY1RP25929 384 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 OR10J1P30954 320 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 KLF9Q13886 244 aaPredicted RBP8.81□□□□□ -1
SSBP3-210ENST00000525990 ZNF79Q15937 498 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 DCANP1Q8TF63 244 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 NPIPB3Q92617 1050 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 ACY3Q96HD9 319 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 RARRES2Q99969 163 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 RBKSQ9H477 322 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 RSL24D1Q9UHA3 163 aaKnown RBP8.81□□□□□ -1
SSBP3-210ENST00000525990 SCP2D1Q9UJQ7 156 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 U3KQE9 123 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 V9GYH0 126 aa8.81□□□□□ -1
SSBP3-210ENST00000525990 NOL3O60936 208 aaKnown RBP8.8□□□□□ -1
SSBP3-210ENST00000525990 LY6G6CO95867 125 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 IL4P05112 153 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 C4BPBP20851 252 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 NANOS2P60321 138 aaKnown RBP8.8□□□□□ -1
SSBP3-210ENST00000525990 CEMP1Q6PRD7 247 aaPredicted RBP8.8□□□□□ -1
SSBP3-210ENST00000525990 OR1S2Q8NGQ3 325 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 OR11H2Q8NH07 326 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 RNASEH2CQ8TDP1 164 aaKnown RBP8.8□□□□□ -1
SSBP3-210ENST00000525990 GLMPQ8WWB7 406 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 IL22RA2Q969J5 263 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 TMEM231Q9H6L2 316 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 HSPB7Q9UBY9 170 aa8.8□□□□□ -1
SSBP3-210ENST00000525990 TRAV30A0A087WSZ9 112 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 TRAV2A0A0B4J234 112 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 A0A0B4J2A0 478 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 RPS10-NUDT3A0A1W2PQS6 291 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 NUPR2A6NF83 97 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 IFNA10P01566 189 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 CMC4P56277 68 aaPredicted RBP8.79□□□□□ -1
SSBP3-210ENST00000525990 SMCO1Q147U7 214 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 PYDC2Q56P42 97 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 C16orf54Q6UWD8 224 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 TMED4Q7Z7H5 227 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
SSBP3-210ENST00000525990 DTD1Q8TEA8 209 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
SSBP3-210ENST00000525990 RABL2AQ9UBK7 228 aaPredicted RBP8.79□□□□□ -1
SSBP3-210ENST00000525990 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 RABL2BQ9UNT1 228 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 KCNIP3Q9Y2W7 256 aa8.79□□□□□ -1
SSBP3-210ENST00000525990 A0A1W2PS18 150 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 CD5P06127 495 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 HNRNPCP07910 306 aaKnown RBP eCLIP8.78□□□□□ -12e-6■■■□□ 18.7
SSBP3-210ENST00000525990 IAPPP10997 89 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 SLC25A4P12235 298 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 CCR6P51684 374 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 YPEL3P61236 119 aaPredicted RBP8.78□□□□□ -1
SSBP3-210ENST00000525990 DHRS2Q13268 280 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 STHQ8IWL8 128 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 LGI3Q8N145 548 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 Q8WTZ3 238 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 GATAD1Q8WUU5 269 aa8.78□□□□□ -1
SSBP3-210ENST00000525990 RBM38Q9H0Z9 239 aaKnown RBP8.78□□□□□ -1
SSBP3-210ENST00000525990 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 CCDC160A6NGH7 325 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 TOMM40O96008 361 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 PSG1P11464 419 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 VAMP1P23763 118 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 DEFB1P60022 68 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 ZNF90Q03938 601 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 PSMG4Q5JS54 123 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 ACTL10Q5JWF8 245 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 Q8NAQ8 132 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 OR51G1Q8NGK1 321 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 OR1S1Q8NH92 325 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 GRAMD2BQ96HH9 432 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 CLEC5AQ9NY25 188 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 FBXL17Q9UF56 701 aa8.77□□□□□ -1.01
SSBP3-210ENST00000525990 PITX3O75364 302 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 SCGB2A1O75556 95 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 RBMY1A1P0DJD3 496 aaKnown RBP8.76□□□□□ -1.01
SSBP3-210ENST00000525990 RBMY1CP0DJD4 496 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 RD3LP0DJH9 198 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 ATF4P18848 351 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-210ENST00000525990 GAMTQ14353 236 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 RBMY1FQ15415 496 aaKnown RBP8.76□□□□□ -1.01
SSBP3-210ENST00000525990 CCDC190Q86UF4 302 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 TOMM5Q8N4H5 51 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
SSBP3-210ENST00000525990 NARS2Q96I59 477 aaKnown RBP8.76□□□□□ -1.01
SSBP3-210ENST00000525990 SCGB3A2Q96PL1 93 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 PBDC1Q9BVG4 233 aa8.76□□□□□ -1.01
SSBP3-210ENST00000525990 C11orf68Q9H3H3 251 aaKnown RBP8.76□□□□□ -1.01
SSBP3-210ENST00000525990 IGHV4-28A0A0C4DH34 117 aa8.75□□□□□ -1.01
SSBP3-210ENST00000525990 FAM90A26D6RGX4 464 aa8.75□□□□□ -1.01
SSBP3-210ENST00000525990 BUB3O43684 328 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms