RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 QRFPP83859 136 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 SMAGPQ0VAQ4 97 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 EXOSC7Q15024 291 aaKnown RBP4.13□□□□□ -1.75
CD44-218ENST00000525469 RTL8BQ17RB0 113 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 LRRC75BQ2VPJ9 315 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 TDRG1Q3Y452 100 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 DEFB134Q4QY38 66 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 ZNF585BQ52M93 769 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 GCSAMLQ5JQS6 135 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 LYPD6Q86Y78 171 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 BOD1L2Q8IYS8 172 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR8B3Q8NGG8 313 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR10AG1Q8NH19 301 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR4F5Q8NH21 305 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR4C3Q8NH37 302 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR52N5Q8NH56 324 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 PFN4Q8NHR9 129 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 ZNF502Q8TBZ5 544 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR51E1Q8TCB6 317 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 GLMPQ8WWB7 406 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 DAZLQ92904 295 aaKnown RBP4.13□□□□□ -1.75
CD44-218ENST00000525469 CHCHD1Q96BP2 118 aaKnown RBP4.13□□□□□ -1.75
CD44-218ENST00000525469 UHRF2Q96PU4 802 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR8B2Q96RD0 313 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 NMNAT3Q96T66 252 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 WFDC6Q9BQY6 131 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 GGTLC1Q9BX51 225 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 TM2D1Q9BX74 207 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 NPFFR1Q9GZQ6 430 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 OR2D2Q9H210 308 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 ELOVL3Q9HB03 270 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 C20orf141Q9NUB4 165 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 TMEM140Q9NV12 185 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 TAS2R4Q9NYW5 299 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 HSPB8Q9UJY1 196 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 TENM1Q9UKZ4 2725 aa4.13□□□□□ -1.75
CD44-218ENST00000525469 A0A096LNT2 108 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 IGKV3D-11A0A0A0MRZ8 115 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 TRAV34A0A0B4J273 112 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 A0A1B0GWA3 101 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 LOC107986453A0A1B0GWG9 222 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 FRG2CA6NGY1 282 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 OR2T8A6NH00 312 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 NPIPB13A6NJU9 1138 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 LRRC30A6NM36 301 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 NPIPB4C9JG80 1138 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 M0R2Z0 102 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 AMY1AP04745 511 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 PGCP20142 388 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 HIST1H1TP22492 207 aaPredicted RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 CLRN1P58418 232 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 KLRD1Q13241 179 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 MPV17L2Q567V2 206 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 TMEM42Q69YG0 159 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 WBP2NLQ6ICG8 309 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 ZNF474Q6S9Z5 364 aaPredicted RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 OLIG3Q7RTU3 272 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 VN1R4Q7Z5H5 301 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 S100A7AQ86SG5 101 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 GVQW1Q8N7I0 195 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 LRRC75AQ8NAA5 344 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 OR10X1Q8NGY0 326 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 WIPF2Q8TF74 440 aaPredicted RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 PP6455Q8WZ26 134 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 MSI2Q96DH6 328 aaKnown RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 ADTRPQ96IZ2 230 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 DGAT2Q96PD7 388 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 QTRT1Q9BXR0 403 aaKnown RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 MAP1LC3CQ9BXW4 147 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 TMEM222Q9H0R3 208 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 C11orf1Q9H5F2 150 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 ZNF665Q9H7R5 613 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 NGBQ9NPG2 151 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 RPRMQ9NS64 109 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 HIF1ANQ9NWT6 349 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 TAAR3PQ9P1P4 343 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 CES1P1Q9UKY3 287 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 SOX21Q9Y651 276 aaPredicted RBP4.12□□□□□ -1.75
CD44-218ENST00000525469 SPCS1Q9Y6A9 102 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 TRRAPQ9Y4A5 3859 aa4.12□□□□□ -1.75
CD44-218ENST00000525469 EXPH5Q8NEV8 1989 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 A0A087WWL8 130 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 A0A0G2JLM5 398 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 C3orf85A0A1B0GTC6 90 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 A0A1B0GV50 99 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 A0A1W2PPM0 123 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 A0A1W2PS18 150 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 FAM90A18PA6NE21 464 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 FAM90A16PA6NEW6 464 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 FAM90A9PA6NNJ1 464 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 FAM90A5PA8MXJ8 464 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 SNURFLB1AK76 121 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 C11orf94C9JXX5 98 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 F5H5K5 113 aa4.11□□□□□ -1.75
CD44-218ENST00000525469 SAP18O00422 153 aaKnown RBP4.11□□□□□ -1.75
CD44-218ENST00000525469 ISLRO14498 428 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms