RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 WFDC12Q8WWY7 111 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 ATP6V0BQ99437 205 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 WDR61Q9GZS3 305 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 GNB4Q9HAV0 340 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 WDR83OSQ9Y284 106 aa12.27□□□□□ -0.45
TSPAN4-213ENST00000524895 TRAV30A0A087WSZ9 112 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 ANKRD34BA5PLL1 514 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 NUDT19A8MXV4 375 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 F8W735 103 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 MPDU1O75352 247 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 CLEC3BP05452 202 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 CDX1P47902 265 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 RAB31Q13636 194 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 TMEM158Q8WZ71 300 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 PARD6GQ9BYG4 376 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 CYTL1Q9NRR1 136 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 BOLA1Q9Y3E2 137 aa12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 LSM4Q9Y4Z0 139 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 TSSC4Q9Y5U2 329 aaPredicted RBP12.26□□□□□ -0.45
TSPAN4-213ENST00000524895 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 NUPL2O15504 423 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 TGOLN2O43493 480 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 IGLC1P0CG04 106 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 ARL3P36405 182 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 EIF5AP63241 154 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 HIST2H2BDQ6DRA6 164 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 KLHL30-AS1Q8NEE0 82 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 C4orf3Q8WVX3 66 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 MGST2Q99735 147 aa12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 PEF1Q9UBV8 284 aaKnown RBP12.25□□□□□ -0.45
TSPAN4-213ENST00000524895 IGKV1D-37A0A075B6S9 117 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 PPP5D1E7EU14 171 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 AGPAT2O15120 278 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 FABP1P07148 127 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 CAMLGP49069 296 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 KRTAP10-3P60369 221 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 TIGITQ495A1 244 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 SPSB3Q6PJ21 355 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 SLC51BQ86UW2 128 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 ZNF709Q8N972 641 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 TRGV9Q99603 122 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 NPCDR1Q9BY65 106 aa12.24□□□□□ -0.45
TSPAN4-213ENST00000524895 C17orf112F2Z3M2 114 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 IGKV1-17P01599 117 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 TRBV12-3P01733 135 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 CTSGP08311 255 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 TPT1P13693 172 aaKnown RBP12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 RUNX1Q01196 453 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 ZNF90Q03938 601 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 CYP2G1PQ6ZSU1 146 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 C18orf65Q6ZTR6 163 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 CHRDL1Q9BU40 450 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 GGTLC1Q9BX51 225 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 KCNIP2Q9NS61 270 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 ATRQ13535 2644 aa12.23□□□□□ -0.45
TSPAN4-213ENST00000524895 I3L521 148 aa12.22□□□□□ -0.45
TSPAN4-213ENST00000524895 ATP6V0CP27449 155 aa12.22□□□□□ -0.45
TSPAN4-213ENST00000524895 ADMP35318 185 aa12.22□□□□□ -0.45
TSPAN4-213ENST00000524895 RELQ04864 619 aaPredicted RBP12.22□□□□□ -0.45
TSPAN4-213ENST00000524895 STOML3Q8TAV4 291 aa12.22□□□□□ -0.45
TSPAN4-213ENST00000524895 GNPNAT1Q96EK6 184 aaPredicted RBP12.22□□□□□ -0.45
TSPAN4-213ENST00000524895 RSG1Q9BU20 258 aa12.22□□□□□ -0.45
TSPAN4-213ENST00000524895 BMPR1BO00238 502 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 GGCTO75223 188 aaKnown RBP12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 YPEL3P61236 119 aaPredicted RBP12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 SELENOTP62341 195 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 ZNF616Q08AN1 781 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 DEFB136Q30KP8 78 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 C8orf86Q6ZUL3 223 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 NDUFA11Q86Y39 141 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 BAP18Q8IXM2 172 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 BPIFCQ8NFQ6 507 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 ST8SIA2Q92186 375 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 GINS3Q9BRX5 216 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 ARV1Q9H2C2 271 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 SLC45A2Q9UMX9 530 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 TIMM9Q9Y5J7 89 aa12.21□□□□□ -0.45
TSPAN4-213ENST00000524895 IGHV4OR15-8A0A075B7B6 117 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 A0A087WW49 117 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 IGHV3-35A0A0C4DH35 117 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 TOMM40O96008 361 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 HSPB1P04792 205 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 RD3LP0DJH9 198 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 NSUN5P1Q3KNT7 163 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 MIC13Q5XKP0 118 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 ZNF600Q6ZNG1 722 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 STPG3Q8N7X2 389 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 Q8WTZ3 238 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 SH3BGRL3Q9H299 93 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 PXMP4Q9Y6I8 212 aa12.2□□□□□ -0.46
TSPAN4-213ENST00000524895 YIF1AO95070 293 aa12.19□□□□□ -0.46
TSPAN4-213ENST00000524895 OR2C1O95371 312 aa12.19□□□□□ -0.46
TSPAN4-213ENST00000524895 LINC00869P0C866 280 aa12.19□□□□□ -0.46
TSPAN4-213ENST00000524895 PSG1P11464 419 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms