RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 HELTA6NFD8 242 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 ZNF705EA8MWA4 302 aaPredicted RBP11.8□□□□□ -0.52
HIF3A-208ENST00000524533 CDS2O95674 445 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
HIF3A-208ENST00000524533 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 RND2P52198 227 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 CTF1Q16619 201 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 FAAP20Q6NZ36 180 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 CENPSQ8N2Z9 138 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 OR52E5Q8NH55 327 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 LHFPL5Q8TAF8 219 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 RBPMSQ93062 196 aaKnown RBP11.8□□□□□ -0.52
HIF3A-208ENST00000524533 X6R8D5 127 aa11.8□□□□□ -0.52
HIF3A-208ENST00000524533 TEX13DA0A0J9YY54 714 aaPredicted RBP11.79□□□□□ -0.52
HIF3A-208ENST00000524533 GABARAPH6UMI1 98 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 SLC25A4P12235 298 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 HLA-DMBP28068 263 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 OR10J1P30954 320 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 MEF2DQ14814 521 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 C2orf83Q53S99 150 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 PSMG4Q5JS54 123 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 PRSS54Q6PEW0 395 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 Q6ZTC4 211 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 SLC24A4Q8NFF2 622 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 RNASEH2CQ8TDP1 164 aaKnown RBP11.79□□□□□ -0.52
HIF3A-208ENST00000524533 Q8WTZ3 238 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 NAA60Q9H7X0 242 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 CACNG5Q9UF02 275 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 TBC1D24Q9ULP9 559 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 U3KQE9 123 aa11.79□□□□□ -0.52
HIF3A-208ENST00000524533 TRAV10A0A0B4J240 114 aa11.78□□□□□ -0.52
HIF3A-208ENST00000524533 CEBPZOSA8MTT3 80 aa11.78□□□□□ -0.52
HIF3A-208ENST00000524533 AP2S1P53680 142 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-208ENST00000524533 YPEL3P61236 119 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-208ENST00000524533 DHODHQ02127 395 aa11.78□□□□□ -0.52
HIF3A-208ENST00000524533 SSBP1Q04837 148 aaKnown RBP11.78□□□□□ -0.52
HIF3A-208ENST00000524533 SURF2Q15527 256 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-208ENST00000524533 GPR107Q5VW38 600 aa11.78□□□□□ -0.52
HIF3A-208ENST00000524533 C16orf54Q6UWD8 224 aa11.78□□□□□ -0.52
HIF3A-208ENST00000524533 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
HIF3A-208ENST00000524533 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
HIF3A-208ENST00000524533 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
HIF3A-208ENST00000524533 RTBDNQ9BSG5 229 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-208ENST00000524533 ELOA3CA0A087WX78 387 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-208ENST00000524533 DISC1C4P0D8 188 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 RGS5O15539 181 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 IL4P05112 153 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 MRPS10P82664 201 aaKnown RBP11.77□□□□□ -0.53
HIF3A-208ENST00000524533 USF2Q15853 346 aaPredicted RBP11.77□□□□□ -0.53
HIF3A-208ENST00000524533 TMEM268Q5VZI3 342 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 ETFRF1Q6IPR1 90 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 RAB40CQ96S21 281 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 MIXL1Q9H2W2 232 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 HERC2O95714 4834 aa11.77□□□□□ -0.53
HIF3A-208ENST00000524533 IGHV4-4A0A075B6R2 117 aa11.76□□□□□ -0.53
HIF3A-208ENST00000524533 CRYM-AS1A6NIL9 109 aa11.76□□□□□ -0.53
HIF3A-208ENST00000524533 NXPH3O95157 252 aa11.76□□□□□ -0.53
HIF3A-208ENST00000524533 NPY1RP25929 384 aa11.76□□□□□ -0.53
HIF3A-208ENST00000524533 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
HIF3A-208ENST00000524533 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
HIF3A-208ENST00000524533 KRTAP17-1Q9BYP8 105 aa11.76□□□□□ -0.53
HIF3A-208ENST00000524533 FAM90A26D6RGX4 464 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 GSTZ1O43708 216 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-208ENST00000524533 TOMM40O96008 361 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 SMIM18P0DKX4 95 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 NUTF2P61970 127 aaKnown RBP11.75□□□□□ -0.53
HIF3A-208ENST00000524533 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 NOXA1Q86UR1 476 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 OR4C16Q8NGL9 310 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 SMIM4Q8WVI0 70 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 ACY3Q96HD9 319 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 C1QTNF4Q9BXJ3 329 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 CELA1Q9UNI1 258 aa11.75□□□□□ -0.53
HIF3A-208ENST00000524533 AKAIN1P0CW23 69 aa11.74□□□□□ -0.53
HIF3A-208ENST00000524533 PRRT1Q99946 306 aa11.74□□□□□ -0.53
HIF3A-208ENST00000524533 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
HIF3A-208ENST00000524533 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
HIF3A-208ENST00000524533 GPR132Q9UNW8 380 aa11.74□□□□□ -0.53
HIF3A-208ENST00000524533 TMEM56-RWDD3S4R434 201 aa11.74□□□□□ -0.53
HIF3A-208ENST00000524533 BUB3O43684 328 aa11.73□□□□□ -0.53
HIF3A-208ENST00000524533 RD3LP0DJH9 198 aa11.73□□□□□ -0.53
HIF3A-208ENST00000524533 SULT1A3P0DMM9 295 aa11.73□□□□□ -0.53
HIF3A-208ENST00000524533 SULT1A4P0DMN0 295 aa11.73□□□□□ -0.53
HIF3A-208ENST00000524533 NMSQ5H8A3 153 aa11.73□□□□□ -0.53
HIF3A-208ENST00000524533 SEPSECSQ9HD40 501 aaKnown RBP11.73□□□□□ -0.53
HIF3A-208ENST00000524533 XCL2Q9UBD3 114 aa11.73□□□□□ -0.53
HIF3A-208ENST00000524533 DEFB131BA0A096LNP1 70 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 H3BMM0 161 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 CTDSP2O14595 271 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 IFNA10P01566 189 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 AMBPP02760 352 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 PSG1P11464 419 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 NUP62P37198 522 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-208ENST00000524533 IL18Q14116 193 aa11.72□□□□□ -0.53
HIF3A-208ENST00000524533 ZNF767PQ75MW2 155 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms