RNA–Protein interactions for RNA: ENST00000523720.1

R3HCC1-209, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-209ENST00000523720 VAMP1P23763 118 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 NPY1RP25929 384 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 SMCO1Q147U7 214 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 C2orf83Q53S99 150 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 LYZL2Q7Z4W2 148 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 LGI3Q8N145 548 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 OR1S2Q8NGQ3 325 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 DEDD2Q8WXF8 326 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 VSIRQ9H7M9 311 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 MAP6D1Q9H9H5 199 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 SHPKQ9UHJ6 478 aa8.76□□□□□ -1.01
R3HCC1-209ENST00000523720 A0A1B0GU03 582 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 NAP1L6A6NFF2 107 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 DNASE2O00115 360 aaPredicted RBP8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 SPRY2O43597 315 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 NPPCP23582 126 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 RND2P52198 227 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 RPL11P62913 178 aaKnown RBP8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 TNFRSF9Q07011 255 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 PPP1R1AQ13522 171 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 RBMS2Q15434 407 aaKnown RBP8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 NMSQ5H8A3 153 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 FAM90A2PQ658T7 463 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 WFDC3Q8IUB2 231 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 CENPSQ8N2Z9 138 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 GBGT1Q8N5D6 347 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 GRAMD2BQ96HH9 432 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 PTTG2Q9NZH5 202 aa8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 MRPL36Q9P0J6 103 aaKnown RBP8.75□□□□□ -1.01
R3HCC1-209ENST00000523720 IGHV3-66A0A0C4DH42 116 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 DUXBA0A1W2PPF3 345 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 CENPXA8MT69 81 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 DFFBO76075 338 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 NDUFB6O95139 128 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 IGLC1P0CG04 106 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 ANXA7P20073 488 aaKnown RBP8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 OR10J1P30954 320 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 P2RY1P47900 373 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 EIF2B2P49770 351 aaKnown RBP8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 TIGITQ495A1 244 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 TMEM128Q5BJH2 165 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 APRG1Q8IVJ8 170 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 TMEM217Q8N7C4 229 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 OR1S1Q8NH92 325 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 DTD1Q8TEA8 209 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 MS4A6AQ9H2W1 248 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 BATF3Q9NR55 127 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 HSPB7Q9UBY9 170 aa8.74□□□□□ -1.01
R3HCC1-209ENST00000523720 LYRM1O43325 122 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 SFT2D2O95562 160 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 IFNA10P01566 189 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 IGKV1-17P01599 117 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 APOHP02749 345 aaPredicted RBP8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 PRSS54Q6PEW0 395 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 RNF183Q96D59 192 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 C7orf50Q9BRJ6 194 aaKnown RBP8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 RABAC1Q9UI14 185 aa8.73□□□□□ -1.01
R3HCC1-209ENST00000523720 A0A0J9YWU9 116 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 C9orf170A2RU37 121 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 MPTX1A8MV57 137 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 HOXB5P09067 269 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 CRYBB3P26998 211 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 NUP62P37198 522 aaPredicted RBP8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 ATP5IP56385 69 aaPredicted RBP8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 YPEL3P61236 119 aaPredicted RBP8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 LINC00299Q6ZSB3 139 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 LYG2Q86SG7 212 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 Q8WTZ3 238 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 GATAD1Q8WUU5 269 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 S100ZQ8WXG8 99 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 ACY3Q96HD9 319 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 CCDC32Q9BV29 185 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 RBKSQ9H477 322 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 U3KQ87 197 aa8.72□□□□□ -1.01
R3HCC1-209ENST00000523720 DNAH7Q8WXX0 4024 aa8.71□□□□□ -1.01
R3HCC1-209ENST00000523720 TRAV6A0A075B6T7 132 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 CXorf65A6NEN9 183 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 NUPR2A6NF83 97 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 HELTA6NFD8 242 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 IFNA4P05014 189 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 IL4P05112 153 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 HNRNPCP07910 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 OR4E1P0C645 316 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 ATF4P18848 351 aaPredicted RBP8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 DEFB131AP59861 70 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 ZNF846Q147U1 533 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 ZNF124Q15973 351 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 MLANAQ16655 118 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 TMEM170AQ8WVE7 144 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 SLC35E1Q96K37 410 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 CSTL1Q9H114 145 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 TBC1D24Q9ULP9 559 aa8.71□□□□□ -1.02
R3HCC1-209ENST00000523720 RYR3Q15413 4870 aa8.7□□□□□ -1.02
R3HCC1-209ENST00000523720 TENM2Q9NT68 2774 aa8.7□□□□□ -1.02
R3HCC1-209ENST00000523720 K7EQG2 157 aa8.7□□□□□ -1.02
R3HCC1-209ENST00000523720 MED6O75586 246 aa8.7□□□□□ -1.02
R3HCC1-209ENST00000523720 ADAP1O75689 374 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms