RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 FAM90A2PQ658T7 463 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 OR1L6Q8NGR2 347 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 C20orf24Q9BUV8 137 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 NUPL2O15504 423 aaKnown RBP16.37■□□□□ 0.21
SQLE-206ENST00000523430 GCHFRP30047 84 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 AKIRIN2Q53H80 203 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 MORN5Q5VZ52 161 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 OR5T1Q8NG75 326 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 PUS1Q9Y606 427 aaKnown RBP eCLIP16.37■□□□□ 0.21
SQLE-206ENST00000523430 S4R3C0 116 aa16.37■□□□□ 0.21
SQLE-206ENST00000523430 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.37■□□□□ 0.216e-8■■■■□ 22
SQLE-206ENST00000523430 MDFIC2A0A1B0GVS7 189 aa16.36■□□□□ 0.21
SQLE-206ENST00000523430 DNASE2O00115 360 aaPredicted RBP16.36■□□□□ 0.21
SQLE-206ENST00000523430 IGLC1P0CG04 106 aa16.36■□□□□ 0.21
SQLE-206ENST00000523430 SELENOTP62341 195 aa16.36■□□□□ 0.21
SQLE-206ENST00000523430 ECSCRQ19T08 205 aa16.36■□□□□ 0.21
SQLE-206ENST00000523430 AWAT1Q58HT5 328 aa16.36■□□□□ 0.21
SQLE-206ENST00000523430 OR4X1Q8NH49 305 aa16.36■□□□□ 0.21
SQLE-206ENST00000523430 NAV2Q8IVL1 2488 aa16.36■□□□□ 0.21
SQLE-206ENST00000523430 LINC01548A6NM66 108 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 H3BUX3 64 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 J3QLI3 93 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 COX7A2P2O60397 106 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 AMY1AP04745 511 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 KIAA0141Q14154 515 aaPredicted RBP16.35■□□□□ 0.21
SQLE-206ENST00000523430 LY6EQ16553 131 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 TMEM88Q6PEY1 159 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 PATE2Q6UY27 113 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 SGMS2Q8NHU3 365 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 UHRF2Q96PU4 802 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 ATP5G3P48201 142 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 CBLN2Q8IUK8 224 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 OR4F5Q8NH21 305 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 ZNF503Q96F45 646 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 OR4F4Q96R69 305 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 C19orf24Q9BVV8 132 aa16.35■□□□□ 0.21
SQLE-206ENST00000523430 C11orf94C9JXX5 98 aa16.34■□□□□ 0.21
SQLE-206ENST00000523430 M0R036 132 aa16.34■□□□□ 0.21
SQLE-206ENST00000523430 TAGLN2P37802 199 aaKnown RBP16.34■□□□□ 0.21
SQLE-206ENST00000523430 AKR1C3P42330 323 aa16.34■□□□□ 0.21
SQLE-206ENST00000523430 DNAJC4Q9NNZ3 241 aa16.34■□□□□ 0.21
SQLE-206ENST00000523430 TMA7Q9Y2S6 64 aaKnown RBP16.34■□□□□ 0.21
SQLE-206ENST00000523430 TRAV5A0A0B4J249 113 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 H3BQ15 152 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 BPIFB3P59826 476 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 TIGITQ495A1 244 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 C10orf113Q5VZT2 155 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 UNQ5815/PRO19632Q6UWF5 114 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 OR1L4Q8NGR5 311 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 TMUB1Q9BVT8 246 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 SLC25A2Q9BXI2 301 aa16.33■□□□□ 0.21
SQLE-206ENST00000523430 MRPL32Q9BYC8 188 aaKnown RBP16.33■□□□□ 0.21
SQLE-206ENST00000523430 TECRQ9NZ01 308 aaKnown RBP16.33■□□□□ 0.21
SQLE-206ENST00000523430 CLN5O75503 358 aa16.33■□□□□ 0.2
SQLE-206ENST00000523430 TSPAN9O75954 239 aa16.33■□□□□ 0.2
SQLE-206ENST00000523430 CST9LP1Q5W188 147 aa16.33■□□□□ 0.2
SQLE-206ENST00000523430 PRSS57Q6UWY2 283 aa16.33■□□□□ 0.2
SQLE-206ENST00000523430 BCL6BQ8N143 479 aaPredicted RBP16.33■□□□□ 0.2
SQLE-206ENST00000523430 OR1B1Q8NGR6 318 aa16.33■□□□□ 0.2
SQLE-206ENST00000523430 NANPQ8TBE9 248 aa16.33■□□□□ 0.2
SQLE-206ENST00000523430 PFDN5Q99471 154 aa16.33■□□□□ 0.2
SQLE-206ENST00000523430 YTHDF2Q9Y5A9 579 aaKnown RBP16.33■□□□□ 0.2
SQLE-206ENST00000523430 ABCA1O95477 2261 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 A6NDX4 124 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 OR7C2O60412 319 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 OR2J3O76001 311 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 IGKV1-17P01599 117 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 ORM2P19652 201 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 FAM110DQ8TAY7 271 aaPredicted RBP16.32■□□□□ 0.2
SQLE-206ENST00000523430 FAM167A-AS1Q96KT0 104 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 ZNF355PQ9NSJ1 428 aa16.32■□□□□ 0.2
SQLE-206ENST00000523430 G3V318 75 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 NDUFB8O95169 186 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 C8orf88P0DMB2 117 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 NIPSNAP3BQ9BS92 247 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 PSG1P11464 419 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 TAS2R45P59539 299 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 OR51G1Q8NGK1 321 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 RNF2Q99496 336 aa16.31■□□□□ 0.2
SQLE-206ENST00000523430 F8W735 103 aaPredicted RBP16.3■□□□□ 0.2
SQLE-206ENST00000523430 TMEM250H0YL14 139 aa16.3■□□□□ 0.2
SQLE-206ENST00000523430 IGHV3-23P01764 117 aa16.3■□□□□ 0.2
SQLE-206ENST00000523430 OR10J4P0C629 311 aa16.3■□□□□ 0.2
SQLE-206ENST00000523430 LINC00305Q7Z4B0 112 aa16.3■□□□□ 0.2
SQLE-206ENST00000523430 WFDC11Q8NEX6 87 aa16.3■□□□□ 0.2
SQLE-206ENST00000523430 OR5AU1Q8NGC0 362 aa16.3■□□□□ 0.2
SQLE-206ENST00000523430 RPUSD4Q96CM3 377 aaKnown RBP16.3■□□□□ 0.2
SQLE-206ENST00000523430 HELZ2Q9BYK8 2649 aaKnown RBP16.3■□□□□ 0.2
SQLE-206ENST00000523430 RPS10P5Q9NQ39 176 aa16.3■□□□□ 0.2
SQLE-206ENST00000523430 C7orf77A4D0Y5 90 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 ZNF674Q2M3X9 581 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 DEFB112Q30KQ8 113 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 PQLC2Q6ZP29 291 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 SUN5Q8TC36 379 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 NPPCP23582 126 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 LYZP61626 148 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 PARLQ9H300 379 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 THYN1Q9P016 225 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 FBXL7Q9UJT9 491 aa16.29■□□□□ 0.2
SQLE-206ENST00000523430 ELOA3CA0A087WX78 387 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms