RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 HNRNPCP07910 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
MRPS28-209ENST00000522987 IGLC1P0CG04 106 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 OR10J1P30954 320 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 USF2Q15853 346 aaPredicted RBP11.14□□□□□ -0.63
MRPS28-209ENST00000522987 BSXQ3C1V8 233 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 PRSS54Q6PEW0 395 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 GPR146Q96CH1 333 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 ACY3Q96HD9 319 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 HECTD4Q9Y4D8 3996 aa11.14□□□□□ -0.63
MRPS28-209ENST00000522987 RPS10-NUDT3A0A1W2PQS6 291 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 ZNF705EA8MWA4 302 aaPredicted RBP11.13□□□□□ -0.63
MRPS28-209ENST00000522987 SCGB2A1O75556 95 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 IGKV3-20P01619 116 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 IL4P05112 153 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 RPL5P46777 297 aaKnown RBP11.13□□□□□ -0.63
MRPS28-209ENST00000522987 FXYD7P58549 80 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 SPCS3P61009 180 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 STEAP1BQ6NZ63 245 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
MRPS28-209ENST00000522987 CENPSQ8N2Z9 138 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 TMEM229BQ8NBD8 167 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 Q8WTZ3 238 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 TMEM222Q9H0R3 208 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 HRH4Q9H3N8 390 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.13□□□□□ -0.63
MRPS28-209ENST00000522987 C14orf166Q9Y224 244 aaKnown RBP11.13□□□□□ -0.63
MRPS28-209ENST00000522987 U3KQE9 123 aa11.13□□□□□ -0.63
MRPS28-209ENST00000522987 M0R2N4 97 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 HTR2BP41595 481 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 TCTAP57738 103 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 TAS2R19P59542 299 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 SLC24A4Q8NFF2 622 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 OR1S2Q8NGQ3 325 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 GLYATL2Q8WU03 294 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 RTBDNQ9BSG5 229 aaPredicted RBP11.12□□□□□ -0.63
MRPS28-209ENST00000522987 MIXL1Q9H2W2 232 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 NAA60Q9H7X0 242 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 KIAA1109Q2LD37 5005 aa11.12□□□□□ -0.63
MRPS28-209ENST00000522987 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 TRAV30A0A087WSZ9 112 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 FAM90A26D6RGX4 464 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 RGS5O15539 181 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 CD74P04233 296 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 ZNF182P17025 639 aaPredicted RBP11.11□□□□□ -0.63
MRPS28-209ENST00000522987 TBPP20226 339 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 EIF2B2P49770 351 aaKnown RBP11.11□□□□□ -0.63
MRPS28-209ENST00000522987 EMP1P54849 157 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 GPR107Q5VW38 600 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 AP3S1Q92572 193 aa11.11□□□□□ -0.63
MRPS28-209ENST00000522987 RBPMSQ93062 196 aaKnown RBP11.11□□□□□ -0.63
MRPS28-209ENST00000522987 CDS2O95674 445 aa11.1□□□□□ -0.63
MRPS28-209ENST00000522987 NPY1RP25929 384 aa11.1□□□□□ -0.63
MRPS28-209ENST00000522987 CTF1Q16619 201 aa11.1□□□□□ -0.63
MRPS28-209ENST00000522987 C2orf83Q53S99 150 aa11.1□□□□□ -0.63
MRPS28-209ENST00000522987 GDF5OSQ5U4N7 250 aa11.1□□□□□ -0.63
MRPS28-209ENST00000522987 OR51G1Q8NGK1 321 aa11.1□□□□□ -0.63
MRPS28-209ENST00000522987 PBDC1Q9BVG4 233 aa11.1□□□□□ -0.63
MRPS28-209ENST00000522987 CTDSP2O14595 271 aa11.09□□□□□ -0.63
MRPS28-209ENST00000522987 SLC25A4P12235 298 aa11.09□□□□□ -0.63
MRPS28-209ENST00000522987 YPEL3P61236 119 aaPredicted RBP11.09□□□□□ -0.63
MRPS28-209ENST00000522987 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
MRPS28-209ENST00000522987 FAM219AQ8IW50 185 aa11.09□□□□□ -0.63
MRPS28-209ENST00000522987 OR4C16Q8NGL9 310 aa11.09□□□□□ -0.63
MRPS28-209ENST00000522987 H3BMM0 161 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 GABARAPH6UMI1 98 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 GABARAPO95166 117 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 IFNA10P01566 189 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 RD3LP0DJH9 198 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 SMIM18P0DKX4 95 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 PSG1P11464 419 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 SNRPD3P62318 126 aaKnown RBP11.08□□□□□ -0.64
MRPS28-209ENST00000522987 OR52E5Q8NH55 327 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
MRPS28-209ENST00000522987 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 RNF126Q9BV68 326 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 PLA2G2EQ9NZK7 142 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 PCLOQ9Y6V0 5065 aa11.08□□□□□ -0.64
MRPS28-209ENST00000522987 CRYM-AS1A6NIL9 109 aa11.07□□□□□ -0.64
MRPS28-209ENST00000522987 DISC1C4P0D8 188 aa11.07□□□□□ -0.64
MRPS28-209ENST00000522987 BUB3O43684 328 aa11.07□□□□□ -0.64
MRPS28-209ENST00000522987 TOMM40O96008 361 aa11.07□□□□□ -0.64
MRPS28-209ENST00000522987 AP2S1P53680 142 aaPredicted RBP11.07□□□□□ -0.64
MRPS28-209ENST00000522987 AARDQ4LEZ3 155 aa11.07□□□□□ -0.64
MRPS28-209ENST00000522987 MUC4Q99102 2169 aa11.07□□□□□ -0.64
MRPS28-209ENST00000522987 NACAE9PAV3 2078 aa11.07□□□□□ -0.64
MRPS28-209ENST00000522987 B3GALNT1O75752 331 aa11.06□□□□□ -0.64
MRPS28-209ENST00000522987 SULT1A3P0DMM9 295 aa11.06□□□□□ -0.64
MRPS28-209ENST00000522987 SULT1A4P0DMN0 295 aa11.06□□□□□ -0.64
MRPS28-209ENST00000522987 ETFRF1Q6IPR1 90 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms