RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 FCN2Q15485 313 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 SPANXN5Q5MJ07 72 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 ETFRF1Q6IPR1 90 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 Q6ZNX1 250 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 WFDC9Q8NEX5 89 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 OR1N2Q8NGR9 330 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 PPP1R1CQ8WVI7 109 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 ASB13Q8WXK3 278 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 CACNG8Q8WXS5 425 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 PINX1Q96BK5 328 aaKnown RBP6.41□□□□□ -1.38
VPS13B-210ENST00000521932 WWC2-AS2Q96NR7 200 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 OR5B12Q96R08 314 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 TMPRSS5Q9H3S3 457 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 GAR1Q9NY12 217 aaKnown RBP6.41□□□□□ -1.38
VPS13B-210ENST00000521932 C21orf62Q9NYP8 219 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 PSENENQ9NZ42 101 aa6.41□□□□□ -1.38
VPS13B-210ENST00000521932 STRAPQ9Y3F4 350 aaKnown RBP6.41□□□□□ -1.38
VPS13B-210ENST00000521932 IGHV4OR15-8A0A075B7B6 117 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 A0A087WW49 117 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 RPS10-NUDT3A0A1W2PQS6 291 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 H0YIZ8 118 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 BMPR1BO00238 502 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 TRBV12-3P01733 135 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 RLN2P04090 185 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 IFNA4P05014 189 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 CTSGP08311 255 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 SLC25A4P12235 298 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 PVALBP20472 110 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-210ENST00000521932 GPX4P36969 197 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-210ENST00000521932 OPRK1P41145 380 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 MFAP4P55083 255 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 DEFB136Q30KP8 78 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 SPSB3Q6PJ21 355 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 TMEM14EPQ6UXP3 125 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 CLEC19AQ6UXS0 136 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 TMEM116Q8NCL8 245 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 OR4X1Q8NH49 305 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 BSCL2Q96G97 398 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-210ENST00000521932 OR4C12Q96R67 309 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 RNF126Q9BV68 326 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 ZNF436Q9C0F3 470 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-210ENST00000521932 LSM5Q9Y4Y9 91 aaKnown RBP6.4□□□□□ -1.38
VPS13B-210ENST00000521932 S4R3C0 116 aa6.4□□□□□ -1.38
VPS13B-210ENST00000521932 IGHV3-21A0A0B4J1V1 117 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 OR2T8A6NH00 312 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 E5RGE8 158 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 L7N2F9 121 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 TGOLN2O43493 480 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 GGCTO75223 188 aaKnown RBP6.39□□□□□ -1.39
VPS13B-210ENST00000521932 MPC2O95563 127 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 IGHV3-23P01764 117 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 GIPP09681 153 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-210ENST00000521932 OR8U8P0C7N1 319 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 LYL1P12980 280 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 ZP3P21754 424 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 HOXD3P31249 432 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-210ENST00000521932 ARL3P36405 182 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 NPBWR1P48145 328 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 VAMP2P63027 116 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 KLF5Q13887 457 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-210ENST00000521932 PRSS54Q6PEW0 395 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 GPHB5Q86YW7 130 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 DPF1Q92782 380 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 DUX3Q96PT4 197 aa6.39□□□□□ -1.39
VPS13B-210ENST00000521932 LYRM2Q9NU23 88 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-210ENST00000521932 ANK2Q01484 3957 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 TRAV30A0A087WSZ9 112 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 PPP5D1E7EU14 171 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 FNDC10F2Z333 226 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 H3BP45 60 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 CLN5O75503 358 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 SCAF4O95104 1147 aaKnown RBP6.38□□□□□ -1.39
VPS13B-210ENST00000521932 OR2C1O95371 312 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 IGHV3-48P01763 117 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 PET100P0DJ07 73 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 GPR183P32249 361 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 P2RY1P47900 373 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 S100A10P60903 97 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 FGL1Q08830 312 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 GAMTQ14353 236 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 RPEL1Q2QD12 228 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 LRRC37A5PQ49AS3 106 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 Q56UQ5 140 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 ACSM6Q6P461 480 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 TMEM252Q8N6L7 170 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 UBAC2Q8NBM4 344 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 OR10P1Q8NGE3 313 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 DLX4Q92988 240 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-210ENST00000521932 CHRDL1Q9BU40 450 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 GGACTQ9BVM4 153 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 OR5AC2Q9NZP5 309 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 MRPL36Q9P0J6 103 aaKnown RBP6.38□□□□□ -1.39
VPS13B-210ENST00000521932 TRRAPQ9Y4A5 3859 aa6.38□□□□□ -1.39
VPS13B-210ENST00000521932 TRAV14DV4A0A0A6YYC5 116 aa6.37□□□□□ -1.39
VPS13B-210ENST00000521932 FAM24AA6NFZ4 105 aa6.37□□□□□ -1.39
VPS13B-210ENST00000521932 LGALS9O00182 355 aa6.37□□□□□ -1.39
VPS13B-210ENST00000521932 NDUFA4O00483 81 aa6.37□□□□□ -1.39
VPS13B-210ENST00000521932 NUPL2O15504 423 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms