RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CLEC19AQ6UXS0 136 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 LILRB2Q8N423 598 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 OR1S2Q8NGQ3 325 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 ACY3Q96HD9 319 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 SLC35E1Q96K37 410 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 TMEM147Q9BVK8 224 aa11.78□□□□□ -0.52
LSM1-203ENST00000520755 PEF1Q9UBV8 284 aaKnown RBP11.78□□□□□ -0.52
LSM1-203ENST00000520755 UBE2L5PA0A1B0GUS4 154 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 OR2T8A6NH00 312 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 PPP5D1E7EU14 171 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 LINC01619G3V211 115 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 CLN5O75503 358 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 S100A11P31949 105 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 ADMP35318 185 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 SLURP1P55000 103 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 MFAP4P55083 255 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 FHL3Q13643 280 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 LGALSLQ3ZCW2 172 aaPredicted RBP11.77□□□□□ -0.53
LSM1-203ENST00000520755 LAMTOR1Q6IAA8 161 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 C9orf62Q8N4C0 152 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 KCNRGQ8N5I3 272 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 THAP8Q8NA92 274 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 UBAC2Q8NBM4 344 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 INO80EQ8NBZ0 244 aaPredicted RBP11.77□□□□□ -0.53
LSM1-203ENST00000520755 NPIPB3Q92617 1050 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 HYLS1Q96M11 299 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 GGACTQ9BVM4 153 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 ZC4H2Q9NQZ6 224 aa11.77□□□□□ -0.53
LSM1-203ENST00000520755 VWFP04275 2813 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 BMPR1BO00238 502 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 IGLC1P0CG04 106 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 CD33P20138 364 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 NUP62P37198 522 aaPredicted RBP11.76□□□□□ -0.53
LSM1-203ENST00000520755 AKR1C1Q04828 323 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 OR2F1Q13607 317 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 Q56UQ5 140 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 ATP6V0BQ99437 205 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 TXN2Q99757 166 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 ATP5SQ99766 215 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 UQCC1Q9NVA1 299 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 WDR83OSQ9Y284 106 aa11.76□□□□□ -0.53
LSM1-203ENST00000520755 LSM4Q9Y4Z0 139 aaKnown RBP11.76□□□□□ -0.53
LSM1-203ENST00000520755 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
LSM1-203ENST00000520755 SMCO3A2RU48 225 aa11.75□□□□□ -0.53
LSM1-203ENST00000520755 TGOLN2O43493 480 aa11.75□□□□□ -0.53
LSM1-203ENST00000520755 CLEC3BP05452 202 aa11.75□□□□□ -0.53
LSM1-203ENST00000520755 CTSGP08311 255 aa11.75□□□□□ -0.53
LSM1-203ENST00000520755 ATP6V1FQ16864 119 aa11.75□□□□□ -0.53
LSM1-203ENST00000520755 TMEM144Q7Z5S9 345 aa11.75□□□□□ -0.53
LSM1-203ENST00000520755 GNG7O60262 68 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 ZP3P21754 424 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 OR10J1P30954 320 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
LSM1-203ENST00000520755 ARL3P36405 182 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 NPBWR1P48145 328 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 TIGITQ495A1 244 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 MGST2Q99735 147 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 CYTL1Q9NRR1 136 aa11.74□□□□□ -0.53
LSM1-203ENST00000520755 BCL2L11O43521 198 aa11.73□□□□□ -0.53
LSM1-203ENST00000520755 ZNF90Q03938 601 aa11.73□□□□□ -0.53
LSM1-203ENST00000520755 RPEL1Q2QD12 228 aa11.73□□□□□ -0.53
LSM1-203ENST00000520755 RPL7L1Q6DKI1 246 aaKnown RBP11.73□□□□□ -0.53
LSM1-203ENST00000520755 TMEM182Q6ZP80 229 aaPredicted RBP11.73□□□□□ -0.53
LSM1-203ENST00000520755 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
LSM1-203ENST00000520755 DLX4Q92988 240 aaPredicted RBP11.73□□□□□ -0.53
LSM1-203ENST00000520755 WDR61Q9GZS3 305 aaKnown RBP11.73□□□□□ -0.53
LSM1-203ENST00000520755 NPVFQ9HCQ7 196 aa11.73□□□□□ -0.53
LSM1-203ENST00000520755 IGHV3-35A0A0C4DH35 117 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 A0A0D9SG52 128 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 DFFBO76075 338 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 FGF7P21781 194 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 SPSB3Q6PJ21 355 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 TEPPQ6URK8 271 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 BTNL8Q6UX41 500 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 TRGV9Q99603 122 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 GGTLC1Q9BX51 225 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 ARL6Q9H0F7 186 aa11.72□□□□□ -0.53
LSM1-203ENST00000520755 PKD1L1Q8TDX9 2849 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 ZFP92A6NM28 416 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 OVOL1O14753 267 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.53
LSM1-203ENST00000520755 OR2C1O95371 312 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 IGLL1P15814 213 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 SYNJ2BPP57105 145 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 WFDC9Q8NEX5 89 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 ARPC5LQ9BPX5 153 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 NPCDR1Q9BY65 106 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 PARD6GQ9BYG4 376 aaPredicted RBP11.71□□□□□ -0.53
LSM1-203ENST00000520755 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 GAR1Q9NY12 217 aaKnown RBP11.71□□□□□ -0.53
LSM1-203ENST00000520755 RFNGQ9Y644 331 aa11.71□□□□□ -0.53
LSM1-203ENST00000520755 TRAV30A0A087WSZ9 112 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 AGPAT2O15120 278 aa11.7□□□□□ -0.54
LSM1-203ENST00000520755 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
LSM1-203ENST00000520755 GATA2P23769 480 aaPredicted RBP11.7□□□□□ -0.54
LSM1-203ENST00000520755 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms