RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 C4BPBP20851 252 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 VAMP1P23763 118 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 F2RP25116 425 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 S100GP29377 79 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 SURF2Q15527 256 aaPredicted RBP6.34□□□□□ -1.39
TRIM35-202ENST00000519219 IZUMO4Q1ZYL8 232 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 SPINK9Q5DT21 86 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 THOC7Q6I9Y2 204 aaKnown RBP6.34□□□□□ -1.39
TRIM35-202ENST00000519219 TOMM20LQ6UXN7 152 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 Q6ZTC4 211 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 CCDC71LQ8N9Z2 235 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 OR13C8Q8NGS7 320 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 ZFAND1Q8TCF1 268 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 MOB3AQ96BX8 217 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 SEC22CQ9BRL7 303 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 MS4A6AQ9H2W1 248 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 TMEM14BQ9NUH8 114 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 CELA1Q9UNI1 258 aa6.34□□□□□ -1.39
TRIM35-202ENST00000519219 ELOA3CA0A087WX78 387 aaPredicted RBP6.33□□□□□ -1.4
TRIM35-202ENST00000519219 TRAV14DV4A0A0A6YYC5 116 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 A0A0B4J293 547 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 TEX13DA0A0J9YY54 714 aaPredicted RBP6.33□□□□□ -1.4
TRIM35-202ENST00000519219 C15orf61A6NNL5 157 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 KNCNA6PVL3 124 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 SNRPGP15A8MWD9 76 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 CYB5BO43169 146 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 DFFBO76075 338 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 IL5P05113 134 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 OR4E1P0C645 316 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 ANXA3P12429 323 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 HLA-DMBP28068 263 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 MFAP4P55083 255 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 RRAS2P62070 204 aaPredicted RBP6.33□□□□□ -1.4
TRIM35-202ENST00000519219 RELQ04864 619 aaPredicted RBP6.33□□□□□ -1.4
TRIM35-202ENST00000519219 TMEM187Q14656 261 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 PHLDA2Q53GA4 152 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 LPCAT3Q6P1A2 487 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 ZNF767PQ75MW2 155 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 HSD17B13Q7Z5P4 300 aaPredicted RBP6.33□□□□□ -1.4
TRIM35-202ENST00000519219 OR1P1Q8NH06 330 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 PINX1Q96BK5 328 aaKnown RBP6.33□□□□□ -1.4
TRIM35-202ENST00000519219 ATP6V0BQ99437 205 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 VSIRQ9H7M9 311 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 CLEC5AQ9NY25 188 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 MRPL36Q9P0J6 103 aaKnown RBP6.33□□□□□ -1.4
TRIM35-202ENST00000519219 X6R8D5 127 aa6.33□□□□□ -1.4
TRIM35-202ENST00000519219 IGHV4-4A0A075B6R2 117 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 A0A1B0GU03 582 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 C7orf66A4D0T2 115 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 ST8SIA3O43173 380 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 SNAPC5O75971 98 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 PI3P19957 117 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 UBE2MP61081 183 aaKnown RBP6.32□□□□□ -1.4
TRIM35-202ENST00000519219 DHRS11Q6UWP2 260 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 TRPT1Q86TN4 253 aaKnown RBP6.32□□□□□ -1.4
TRIM35-202ENST00000519219 LHFPL1Q86WI0 220 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 CMTM1Q8IZ96 169 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 COQ8AQ8NI60 647 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 ZNF431Q8TF32 576 aaPredicted RBP6.32□□□□□ -1.4
TRIM35-202ENST00000519219 PPP1R14BQ96C90 147 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 SEC22AQ96IW7 307 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 MGAT4CQ9UBM8 478 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 PRNDQ9UKY0 176 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 NACAE9PAV3 2078 aa6.32□□□□□ -1.4
TRIM35-202ENST00000519219 M0R2N4 97 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 GPR31O00270 319 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 GOSR2O14653 212 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 RTL8CO15255 209 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 GNG7O60262 68 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 PIGPP57054 158 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 RPL11P62913 178 aaKnown RBP6.31□□□□□ -1.4
TRIM35-202ENST00000519219 DHRS2Q13268 280 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 PPP1R1AQ13522 171 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 MLANAQ16655 118 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 TMEM128Q5BJH2 165 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 C12orf45Q8N5I9 185 aaPredicted RBP6.31□□□□□ -1.4
TRIM35-202ENST00000519219 ZNF114Q8NC26 417 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 MRGPRFQ96AM1 343 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 ZNF486Q96H40 463 aaPredicted RBP6.31□□□□□ -1.4
TRIM35-202ENST00000519219 TMEM56Q96MV1 263 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 PDCD10Q9BUL8 212 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 RABAC1Q9UI14 185 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 GPR132Q9UNW8 380 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
TRIM35-202ENST00000519219 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
TRIM35-202ENST00000519219 C9orf170A2RU37 121 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 K7EQG2 157 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 DNASE2O00115 360 aaPredicted RBP6.3□□□□□ -1.4
TRIM35-202ENST00000519219 SFT2D2O95562 160 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 ZNF688P0C7X2 276 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 UCP3P55916 312 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
TRIM35-202ENST00000519219 TCTAP57738 103 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 PRCDQ00LT1 54 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 FCN2Q15485 313 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 ZFP69Q49AA0 526 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 TBC1D26Q86UD7 250 aa6.3□□□□□ -1.4
TRIM35-202ENST00000519219 STHQ8IWL8 128 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms