RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 TVP23BQ9NYZ1 205 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 CISD1Q9NZ45 108 aaKnown RBP4.44□□□□□ -1.7
NUP54-218ENST00000515460 C1RLQ9NZP8 487 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 ANXA10Q9UJ72 324 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 VDAC3Q9Y277 283 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 WASHC3Q9Y3C0 194 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 MED31Q9Y3C7 131 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 IER3IP1Q9Y5U9 82 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 CHCHD2Q9Y6H1 151 aaPredicted RBP4.44□□□□□ -1.7
NUP54-218ENST00000515460 PXMP4Q9Y6I8 212 aa4.44□□□□□ -1.7
NUP54-218ENST00000515460 TRBV4-1A0A0J9YWV2 114 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 DUXBA0A1W2PPF3 345 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 DPRXA6NFQ7 191 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 MSGN1A6NI15 193 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 F5H5K5 113 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 SLC16A7O60669 478 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 MPZL1O95297 269 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 KRASP01116 189 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 HPNP05981 417 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 CT45A6P0DMU7 189 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 CT45A5P0DMU8 189 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 CT45A7P0DMV0 189 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 PMCHP20382 165 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 RPL12P30050 165 aaKnown RBP4.43□□□□□ -1.7
NUP54-218ENST00000515460 OPRM1P35372 400 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 CDKN1AP38936 164 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 DLX6P56179 175 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 RND3P61587 244 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 EWSR1Q01844 656 aaKnown RBP eCLIP4.43□□□□□ -1.7
NUP54-218ENST00000515460 MFGE8Q08431 387 aaPredicted RBP4.43□□□□□ -1.7
NUP54-218ENST00000515460 GGTLC2Q14390 218 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 CT45A1Q5HYN5 189 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 OR4C11Q6IEV9 310 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 TMEM64Q6YI46 380 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 ZNF621Q6ZSS3 439 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 Q6ZSV7 163 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 RNF144BQ7Z419 303 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 PPP1R27Q86WC6 154 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 TEX29Q8N6K0 151 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 OR4A5Q8NH83 315 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 CT45A3Q8NHU0 189 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 C8orf46Q8TAG6 207 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 SYNPRQ8TBG9 265 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 PLPPR1Q8TBJ4 325 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 ST8SIA1Q92185 356 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 COQ2Q96H96 371 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 TSSK2Q96PF2 358 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 SCGB3A2Q96PL1 93 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 DERL3Q96Q80 235 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 EBPLQ9BY08 206 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 MAP1LC3AQ9H492 121 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 HES4Q9HCC6 221 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 RPRMQ9NS64 109 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 PCTPQ9UKL6 214 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 TRAPPC1Q9Y5R8 145 aa4.43□□□□□ -1.7
NUP54-218ENST00000515460 SOX21Q9Y651 276 aaPredicted RBP4.43□□□□□ -1.7
NUP54-218ENST00000515460 KBTBD11-OT1A0A1B0GTJ5 212 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 A0A1B0GUS0 222 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 FAM231BA6NCW3 169 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 EEF1E1-BLOC1S5C9J1V9 151 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 J3QRE1 110 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 ST8SIA3O43173 380 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 DHRS3O75911 302 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 CT62P0C5K7 136 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 FABP2P12104 132 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 ZNF43P17038 809 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 ADRA2CP18825 462 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 AADACP22760 399 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 CDK2P24941 298 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 GRPRP30550 384 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 FCGR2BP31994 310 aaPredicted RBP4.42□□□□□ -1.7
NUP54-218ENST00000515460 FCGR2CP31995 323 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 PRSS3P35030 304 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 FBXW4P57775 412 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 KRTDAPP60985 99 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 RPL27P61353 136 aaKnown RBP4.42□□□□□ -1.7
NUP54-218ENST00000515460 PPP1CBP62140 327 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 RPL38P63173 70 aaKnown RBP4.42□□□□□ -1.7
NUP54-218ENST00000515460 FUT5Q11128 374 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 PSG7Q13046 419 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 PMVKQ15126 192 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 HLA-DRB5Q30154 266 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 MS4A18Q3C1V0 323 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 MPV17L2Q567V2 206 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 OR10J3Q5JRS4 329 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 DMKNQ6E0U4 476 aaPredicted RBP4.42□□□□□ -1.7
NUP54-218ENST00000515460 ZNF880Q6PDB4 577 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 SLC25A34Q6PIV7 304 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 LCN15Q6UWW0 184 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 ZNF611Q8N823 705 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 ZNF441Q8N8Z8 693 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 C8orf31Q8N9H6 132 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 OR2M3Q8NG83 312 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 OR8B12Q8NGG6 310 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 OR51A4Q8NGJ6 313 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 OR5H2Q8NGV7 314 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 OR10AG1Q8NH19 301 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 OR4A16Q8NH70 328 aa4.42□□□□□ -1.7
NUP54-218ENST00000515460 ZNF502Q8TBZ5 544 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms