RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 MRPL52Q86TS9 123 aaKnown RBP11.08□□□□□ -0.64
TCOF1-214ENST00000515035 CHCHD2Q9Y6H1 151 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-214ENST00000515035 EVI2AP22794 236 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 SUPT4H1P63272 117 aaKnown RBP11.08□□□□□ -0.64
TCOF1-214ENST00000515035 DMRTC2Q8IXT2 367 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-214ENST00000515035 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 TET1Q8NFU7 2136 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 TGFBR3LH3BV60 316 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 CECR9P0C854 216 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 GAS1P54826 345 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 PSG7Q13046 419 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 CD300EQ496F6 205 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-214ENST00000515035 SMPXQ9UHP9 88 aa11.08□□□□□ -0.64
TCOF1-214ENST00000515035 TDRD6O60522 2096 aaKnown RBP11.07□□□□□ -0.64
TCOF1-214ENST00000515035 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 LINC00271P0C7V0 271 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
TCOF1-214ENST00000515035 NRN1LQ496H8 165 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 LHFPL1Q86WI0 220 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 YAE1D1Q9NRH1 226 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 TCRBV4S1A1TA0A5B7 111 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 TIAF1O95411 115 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
TCOF1-214ENST00000515035 ATXN8Q156A1 80 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 GTSCR1Q86UQ5 136 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 INTS1Q8N201 2190 aaKnown RBP11.07□□□□□ -0.64
TCOF1-214ENST00000515035 SAA2-SAA4A0A096LPE2 208 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 IGKV1D-33P01593 117 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 IGKV1-33P01594 117 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 SAA2P0DJI9 122 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-214ENST00000515035 RPP25LQ8N5L8 163 aaKnown RBP11.07□□□□□ -0.64
TCOF1-214ENST00000515035 FDCSPQ8NFU4 85 aa11.07□□□□□ -0.64
TCOF1-214ENST00000515035 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 POLEQ07864 2286 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 PAX1P15863 534 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 CCL1P22362 96 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 WBP1Q96G27 269 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 TMEM155Q4W5P6 130 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 RNF125Q96EQ8 232 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 DUX3Q96PT4 197 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 YPEL1O60688 119 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 TREML4Q6UXN2 200 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 OR10W1Q8NGF6 305 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 YPEL2Q96QA6 119 aa11.06□□□□□ -0.64
TCOF1-214ENST00000515035 ADCYAP1P18509 176 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 LYZL4Q96KX0 146 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 DOCK10Q96BY6 2186 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 SLC25A48Q6ZT89 311 aaKnown RBP11.05□□□□□ -0.64
TCOF1-214ENST00000515035 GP6Q9HCN6 339 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 ZNF319Q9P2F9 582 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 CLEC19AQ6UXS0 136 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 PPP1R27Q86WC6 154 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 LTBP1Q14766 1721 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 GGTLC3B5MD39 225 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 PVRIGQ6DKI7 326 aa11.05□□□□□ -0.64
TCOF1-214ENST00000515035 HEATR1Q9H583 2144 aaKnown RBP11.05□□□□□ -0.64
TCOF1-214ENST00000515035 SEPSECSQ9HD40 501 aaKnown RBP11.05□□□□□ -0.64
TCOF1-214ENST00000515035 ZNF497Q6ZNH5 498 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 LINC00312Q9Y6C7 94 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 RALGAPA1Q6GYQ0 2036 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 CHD5Q8TDI0 1954 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 A8MWP6 167 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 LYPD3O95274 346 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 EFEMP2O95967 443 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 PRCDQ00LT1 54 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 PRR31Q5SQ13 230 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 RFNGQ9Y644 331 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 ZNF236Q9UL36 1845 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 B9A039 149 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 GHRHP01286 108 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 CELA3AP09093 270 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 AGMATQ9BSE5 352 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 A0A0U1RRA0 63 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 M0R2P5 195 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 CD7P09564 240 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 MST1P26927 711 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 MORN2Q502X0 79 aa11.04□□□□□ -0.64
TCOF1-214ENST00000515035 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-214ENST00000515035 RASL11AQ6T310 242 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 FAM90A1Q86YD7 464 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 CD5LO43866 347 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 DUTP33316 252 aaKnown RBP11.03□□□□□ -0.64
TCOF1-214ENST00000515035 HGFACQ04756 655 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 DLX4Q92988 240 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-214ENST00000515035 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 MPDZO75970 2070 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 CACNA1GO43497 2377 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 IQCF6A8MYZ5 107 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 D6R8Y8 96 aa11.03□□□□□ -0.64
TCOF1-214ENST00000515035 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms