RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ZNF324O75467 553 aaPredicted RBP5.98□□□□□ -1.45
CLIP1-205ENST00000514271 LOXL3P58215 753 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 GCSAMLQ5JQS6 135 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 KHDC1LQ5JSQ8 128 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 FAM78BQ5VT40 261 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 NEGR1Q7Z3B1 354 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 LRP11Q86VZ4 500 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 TMEM37Q8WXS4 190 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 BORCS8Q96FH0 119 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 COQ2Q96H96 371 aa5.98□□□□□ -1.45
CLIP1-205ENST00000514271 LIN7CQ9NUP9 197 aaKnown RBP5.98□□□□□ -1.45
CLIP1-205ENST00000514271 SCO2A0A1W2PP80 73 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 TPPP2P59282 170 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 RELBQ01201 579 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 COX19Q49B96 90 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 FFAR4Q5NUL3 377 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 SCCPDHQ8NBX0 429 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 OR10W1Q8NGF6 305 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 LHX4Q969G2 390 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 NRN1Q9NPD7 142 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 TMEM14BQ9NUH8 114 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 PIEZO2Q9H5I5 2752 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 CHD6Q8TD26 2715 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 IGKV1OR2-108A0A075B7D4 117 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 CELA3BP08861 270 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 DEFA4P12838 97 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 CFHR2P36980 270 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 HERV-K104P61576 105 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 RAB9BQ9NP90 201 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 UQCR10Q9UDW1 63 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 ASPMQ8IZT6 3477 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 UBE2L5PA0A1B0GUS4 154 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 ANKRD30BLA7E2S9 258 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 MT-ND6P03923 174 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 RNASEKQ6P5S7 137 aaKnown RBP5.97□□□□□ -1.45
CLIP1-205ENST00000514271 KCNIP4Q6PIL6 250 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 C19orf35Q6ZS72 473 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 ZNF439Q8NDP4 499 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 SLC25A40Q8TBP6 338 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 PIFOQ8TCI5 191 aa5.97□□□□□ -1.45
CLIP1-205ENST00000514271 C17orf100A8MU93 164 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 OR5G3P0C626 314 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 OR9G9P0C7N8 305 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 TFPI2P48307 235 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 FOXA3P55318 350 aaPredicted RBP5.96□□□□□ -1.45
CLIP1-205ENST00000514271 C4orf48Q5BLP8 95 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 KIR3DL3Q8N743 410 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 KLF14Q8TD94 323 aaPredicted RBP5.96□□□□□ -1.45
CLIP1-205ENST00000514271 ZDHHC16Q969W1 377 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 SLC25A22Q9H936 323 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 PPIAL4AQ9Y536 164 aa5.96□□□□□ -1.45
CLIP1-205ENST00000514271 TRBV6-1A0A0K0K1D8 114 aa5.96□□□□□ -1.46
CLIP1-205ENST00000514271 GRIFINA4D1Z8 144 aa5.96□□□□□ -1.46
CLIP1-205ENST00000514271 C19orf71A6NCJ1 209 aa5.96□□□□□ -1.46
CLIP1-205ENST00000514271 TIMM8AO60220 97 aaPredicted RBP5.96□□□□□ -1.46
CLIP1-205ENST00000514271 NDUFB4O95168 129 aa5.96□□□□□ -1.46
CLIP1-205ENST00000514271 CBLN1P23435 193 aa5.96□□□□□ -1.46
CLIP1-205ENST00000514271 TIMD4Q96H15 378 aa5.96□□□□□ -1.46
CLIP1-205ENST00000514271 MGAQ8IWI9 3026 aa5.96□□□□□ -1.46
CLIP1-205ENST00000514271 GGTLC3B5MD39 225 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 RPL19P84098 196 aaKnown RBP5.95□□□□□ -1.46
CLIP1-205ENST00000514271 FBLN7Q53RD9 439 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 FAM53AQ6NSI3 398 aaPredicted RBP5.95□□□□□ -1.46
CLIP1-205ENST00000514271 NECAP1Q8NC96 275 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 OR5AU1Q8NGC0 362 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 OR2V2Q96R30 315 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 HSPB9Q9BQS6 159 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 RTL8AQ9BWD3 113 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 CLEC7AQ9BXN2 247 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 FREM1Q5H8C1 2179 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 MED12Q93074 2177 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 ZZEF1O43149 2961 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 A0A096LNJ9 63 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 H3BP45 60 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 PSPNO60542 156 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 ZNF253O75346 499 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 IGLL1P15814 213 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 C22orf34Q6ZV56 151 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 MKXQ8IYA7 352 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 FAM110DQ8TAY7 271 aaPredicted RBP5.95□□□□□ -1.46
CLIP1-205ENST00000514271 FOXA2Q9Y261 457 aaPredicted RBP5.95□□□□□ -1.46
CLIP1-205ENST00000514271 MYO18BQ8IUG5 2567 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 F2RL2O00254 374 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 S1PR2O95136 353 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 OR2H2O95918 312 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 CXorf1O96002 111 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 OR51H1Q8NH63 302 aa5.95□□□□□ -1.46
CLIP1-205ENST00000514271 RPUSD4Q96CM3 377 aaKnown RBP5.95□□□□□ -1.46
CLIP1-205ENST00000514271 A0A0U1RRA0 63 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 FAM181BA6NEQ2 426 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 CD300LBA8K4G0 201 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 C17orf112F2Z3M2 114 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 SIRPB1O00241 398 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 TNFSF12O43508 249 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 ARL14EPLP0DKL9 152 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 IAPPP10997 89 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 EDN2P20800 178 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 RAB31Q13636 194 aa5.94□□□□□ -1.46
CLIP1-205ENST00000514271 SMIM21Q3B7S5 101 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms