RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 ADH4P08319 380 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 REG1BP48304 166 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 TMEM177Q53S58 311 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 BVES-AS1Q5T3Y7 98 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 OR1B1Q8NGR6 318 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 ZNF430Q9H8G1 570 aaPredicted RBP7.88□□□□□ -1.15
VCAN-210ENST00000513960 TTC28Q96AY4 2481 aa7.88□□□□□ -1.15
VCAN-210ENST00000513960 IGHV1-18A0A0C4DH31 117 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 A0A1W2PRE2 83 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 PGPA6NDG6 321 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 GNG7O60262 68 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 GPR183P32249 361 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 VDAC2P45880 294 aaPredicted RBP7.87□□□□□ -1.15
VCAN-210ENST00000513960 IGFL2Q6UWQ7 119 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 FA2HQ7L5A8 372 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 PIP4P1Q86T03 277 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 TRAV8-6A0A0B4J262 113 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 SYS1-DBNDD2H3BUS1 97 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 MMP23AO75900 390 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 WT1P19544 449 aaPredicted RBP7.87□□□□□ -1.15
VCAN-210ENST00000513960 C10orf113Q5VZT2 155 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 SPATA12Q7Z6I5 190 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 OR10W1Q8NGF6 305 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 C11orf52Q96A22 123 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 GRAMD2BQ96HH9 432 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 ZNF71Q9NQZ8 489 aaPredicted RBP7.87□□□□□ -1.15
VCAN-210ENST00000513960 MRPL27Q9P0M9 148 aaKnown RBP7.87□□□□□ -1.15
VCAN-210ENST00000513960 SAA2-SAA4A0A096LPE2 208 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 PEX7O00628 323 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 HBBP68871 147 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 MBNL2Q5VZF2 373 aaKnown RBP7.87□□□□□ -1.15
VCAN-210ENST00000513960 PDPNQ86YL7 162 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 Q8TCH9 128 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 SMIM12Q96EX1 92 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 ASCL2Q99929 193 aa7.87□□□□□ -1.15
VCAN-210ENST00000513960 INTS1Q8N201 2190 aaKnown RBP7.87□□□□□ -1.15
VCAN-210ENST00000513960 SPRY3O43610 288 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 HLA-DRB1P01911 266 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 P0C879 139 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 FXYD7P58549 80 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 SH3BGRL2Q9UJC5 107 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 FRYQ5TBA9 3013 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 M0R1B8 84 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 IGLV1-44P01699 117 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 COL8A1P27658 744 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 NMUP48645 174 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 RTL8BQ17RB0 113 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 C1orf185Q5T7R7 199 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 ST20Q9HBF5 79 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 SSUH2Q9Y2M2 353 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 LY96Q9Y6Y9 160 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 C15orf61A6NNL5 157 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 TMEM238C9JI98 176 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 MOSP00540 346 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 REG1AP05451 166 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 MORN2Q502X0 79 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 GDF5OSQ5U4N7 250 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 MORN5Q5VZ52 161 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 WFDC3Q8IUB2 231 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 CD177Q8N6Q3 437 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 OR4F17Q8NGA8 305 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 TMSB15BA0A087X1C1 80 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 SMIM27A0A1W2PRY6 76 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 FAM231BA6NCW3 169 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 PLP1P60201 277 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 FAM162BQ5T6X4 162 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 CLEC2AQ6UVW9 174 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 ZNRD1Q9P1U0 126 aa7.86□□□□□ -1.15
VCAN-210ENST00000513960 LSM4Q9Y4Z0 139 aaKnown RBP7.86□□□□□ -1.15
VCAN-210ENST00000513960 PLCE1Q9P212 2302 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 A0A1W2PRD5 423 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 A0A1W2PRF3 423 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 A0A1W2PRM7 423 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 ERHP84090 104 aaKnown RBP7.85□□□□□ -1.15
VCAN-210ENST00000513960 TEX45Q8NA69 505 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 NPIPB3Q92617 1050 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 CSTL1Q9H114 145 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 IGHV1-24A0A0C4DH33 117 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 H0YJW9 148 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 MGST3O14880 152 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 ENSAO43768 121 aaKnown RBP7.85□□□□□ -1.15
VCAN-210ENST00000513960 MOGAT3Q86VF5 341 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 EIF4EBP1Q13541 118 aaPredicted RBP7.85□□□□□ -1.15
VCAN-210ENST00000513960 TMUB1Q9BVT8 246 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 CALYQ9NYX4 217 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 THYN1Q9P016 225 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 SLC25A10Q9UBX3 287 aaPredicted RBP7.85□□□□□ -1.15
VCAN-210ENST00000513960 SLC25A15Q9Y619 301 aa7.85□□□□□ -1.15
VCAN-210ENST00000513960 CACNA1GO43497 2377 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 hADV38S2A0JD32 116 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 SRRM5B3KS81 715 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 SAA2P0DJI9 122 aaPredicted RBP7.84□□□□□ -1.15
VCAN-210ENST00000513960 ZNF134P52741 427 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 DKK4Q9UBT3 224 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 HSPB8Q9UJY1 196 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 JPT1Q9UK76 154 aa7.84□□□□□ -1.15
VCAN-210ENST00000513960 OTOGLQ3ZCN5 2332 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms