RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ZC4H2Q9NQZ6 224 aa6.23□□□□□ -1.41
NEDD4-210ENST00000513957 MRPL27Q9P0M9 148 aaKnown RBP6.23□□□□□ -1.41
NEDD4-210ENST00000513957 DNAH3Q8TD57 4116 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 LINC00854A0A1B0GVQ3 168 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 FAM240BA0A1B0GVZ2 78 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 TMEM213A2RRL7 107 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 K7EIL1 84 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 K7EMT4 169 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 OR2C1O95371 312 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 IGHV3-23P01764 117 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 CD5P06127 495 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 GP9P14770 177 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 BMI1P35226 326 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 DEFA1P59665 94 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 DEFA3P59666 94 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 SPINK9Q5DT21 86 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 UBAC2Q8NBM4 344 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 DYNLRB2Q8TF09 96 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 PINX1Q96BK5 328 aaKnown RBP6.22□□□□□ -1.41
NEDD4-210ENST00000513957 GINS3Q9BRX5 216 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 NUDT15Q9NV35 164 aa6.22□□□□□ -1.41
NEDD4-210ENST00000513957 PRKDCP78527 4128 aaKnown RBP6.21□□□□□ -1.41
NEDD4-210ENST00000513957 TRAV25A0A0B4J276 109 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 WI2-2373I1.2A0A1W2PRP0 233 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 CLN5O75503 358 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 CTSGP08311 255 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 FOLR2P14207 255 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 SPNP16150 400 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 ANXA7P20073 488 aaKnown RBP6.21□□□□□ -1.42
NEDD4-210ENST00000513957 CBLN1P23435 193 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 RAB11AP62491 216 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 GGNBP1Q5YKI7 109 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 ZNF600Q6ZNG1 722 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 GTSCR1Q86UQ5 136 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 TMEM116Q8NCL8 245 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 ENKURQ8TC29 256 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 CACNG8Q8WXS5 425 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 OR10C1Q96KK4 312 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 RBKSQ9H477 322 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 TBC1D24Q9ULP9 559 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 FLVCR2Q9UPI3 526 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 SMAD5-AS1Q9Y6J3 95 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 S4R3C0 116 aa6.21□□□□□ -1.42
NEDD4-210ENST00000513957 A8MZ25 164 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 SYNGR2O43760 224 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 PRAF2O60831 178 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
NEDD4-210ENST00000513957 IFNA10P01566 189 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 PRB2P02812 416 aaPredicted RBP6.2□□□□□ -1.42
NEDD4-210ENST00000513957 IL5P05113 134 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 HOXB5P09067 269 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 H2AFB2P0C5Z0 115 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 GAGE13Q4V321 117 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 UNQ9165/PRO28630Q6UXU0 137 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 OR1S2Q8NGQ3 325 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 ZNF431Q8TF32 576 aaPredicted RBP6.2□□□□□ -1.42
NEDD4-210ENST00000513957 SAT2Q96F10 170 aaPredicted RBP6.2□□□□□ -1.42
NEDD4-210ENST00000513957 B9D2Q9BPU9 175 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 CHRDL1Q9BU40 450 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 FNDC4Q9H6D8 234 aaPredicted RBP6.2□□□□□ -1.42
NEDD4-210ENST00000513957 TMEM231Q9H6L2 316 aa6.2□□□□□ -1.42
NEDD4-210ENST00000513957 LSM4Q9Y4Z0 139 aaKnown RBP6.2□□□□□ -1.42
NEDD4-210ENST00000513957 TRAV6A0A075B6T7 132 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 IGHV3-21A0A0B4J1V1 117 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 WRBO00258 174 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 TMEM50AO95807 157 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 IFNA4P05014 189 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 FABP1P07148 127 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 GPX4P36969 197 aaPredicted RBP6.19□□□□□ -1.42
NEDD4-210ENST00000513957 NKX2-1P43699 371 aaPredicted RBP6.19□□□□□ -1.42
NEDD4-210ENST00000513957 TAS2R30P59541 319 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 YPEL3P61236 119 aaPredicted RBP6.19□□□□□ -1.42
NEDD4-210ENST00000513957 DEFB114Q30KQ6 69 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 CD300EQ496F6 205 aaPredicted RBP6.19□□□□□ -1.42
NEDD4-210ENST00000513957 LAMTOR1Q6IAA8 161 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 UXS1Q8NBZ7 420 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 OR4D5Q8NGN0 318 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 PRR25Q96S07 402 aa6.19□□□□□ -1.42
NEDD4-210ENST00000513957 SSBP4Q9BWG4 385 aaPredicted RBP6.19□□□□□ -1.42
NEDD4-210ENST00000513957 GPN1Q9HCN4 374 aaPredicted RBP6.19□□□□□ -1.42
NEDD4-210ENST00000513957 IGHV7-4-1A0A0J9YVY3 117 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 A0A1W2PS18 150 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 SNRPGP15A8MWD9 76 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 B5MCH6 92 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 ADAP1O75689 374 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 NXPH3O95157 252 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 IGLC1P0CG04 106 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 NHLRC4P0CG21 123 aaPredicted RBP6.18□□□□□ -1.42
NEDD4-210ENST00000513957 NUP62P37198 522 aaPredicted RBP6.18□□□□□ -1.42
NEDD4-210ENST00000513957 IAH1Q2TAA2 248 aaPredicted RBP6.18□□□□□ -1.42
NEDD4-210ENST00000513957 DEFB121Q5J5C9 76 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 PRSS54Q6PEW0 395 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 ADAMTSL5Q6ZMM2 481 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 RBPMS2Q6ZRY4 209 aaKnown RBP6.18□□□□□ -1.42
NEDD4-210ENST00000513957 SLC16A13Q7RTY0 426 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 TMEM170AQ8WVE7 144 aa6.18□□□□□ -1.42
NEDD4-210ENST00000513957 NARS2Q96I59 477 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms