RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 SFTPCP11686 197 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 Q0VFX4 171 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 NUP35Q8NFH5 326 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 CLEC7AQ9BXN2 247 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 DENND4AQ7Z401 1863 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 TRBV20OR9-2A0A075B6H5 130 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 FOXI3A8MTJ6 420 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-209ENST00000513761 M0R3E3 92 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 TMEM78Q5T7P6 136 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 ZCCHC24Q8N2G6 241 aaKnown RBP6.4□□□□□ -1.38
CLCN3-209ENST00000513761 TEX45Q8NA69 505 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 C9orf106Q8NAJ2 232 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 KIR3DL3Q8N743 410 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 OR1N2Q8NGR9 330 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 FOXA2Q9Y261 457 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-209ENST00000513761 SOX21Q9Y651 276 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-209ENST00000513761 FRMPD3Q5JV73 1810 aa6.4□□□□□ -1.38
CLCN3-209ENST00000513761 HTN1P15515 57 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 FAM27E3Q08E93 113 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 PRSS8Q16651 343 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 CD177Q8N6Q3 437 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 ST20Q9HBF5 79 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 DLX1P56177 255 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 CACNG7P62955 275 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 ASPHD1Q5U4P2 390 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 RAB1BQ9H0U4 201 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 PSG1P11464 419 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 HIST1H1AQ02539 215 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-209ENST00000513761 FOXC2Q99958 501 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 JKAMPQ9P055 326 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 SPRR3Q9UBC9 169 aa6.4□□□□□ -1.39
CLCN3-209ENST00000513761 TCRBV4S1A1TA0A5B7 111 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 MFAP4P55083 255 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 FXYD7P58549 80 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 Q5PR19 223 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 GP6Q9HCN6 339 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 ETV2O00321 342 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-209ENST00000513761 TYMSP04818 313 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 ORMDL3Q8N138 153 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 ORAOV1Q8WV07 137 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 F2Z2F3 143 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 PNKDQ8N490 385 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 FAM90A9PA6NNJ1 464 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 IGHV3-49A0A0A0MS15 119 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 IGHV3-66A0A0C4DH42 116 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 NPIPB11E5RHQ5 1161 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 IGLV3-1P01715 115 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 C1RLQ9NZP8 487 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 ARHGAP21Q5T5U3 1957 aa6.39□□□□□ -1.39
CLCN3-209ENST00000513761 PPIAL4CA0A0B4J2A2 164 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 TMEM238LA0A1B0GVL6 79 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 A6NJY4 79 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 SH2D7A6NKC9 451 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 PPIAL4GP0DN37 164 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 Q0VG73 95 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 SFTA2Q6UW10 78 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 NHP2Q9NX24 153 aaKnown RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 F2RL2O00254 374 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 C16orf92Q96LL3 132 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 TM4SF5O14894 197 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 PSG9Q00887 426 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 TPTE2P1Q5T6R2 138 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 CIARTQ8N365 385 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 TMEM105Q8N8V8 129 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 CHCHD1Q96BP2 118 aaKnown RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 RABAC1Q9UI14 185 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 CADP27708 2225 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 A0A1B0GWB2 263 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 C9orf172C9J069 976 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 CD24P25063 80 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 ZFP36L1Q07352 338 aaKnown RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 TMEM30BQ3MIR4 351 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 OR2K2Q8NGT1 345 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 PRDM6Q9NQX0 595 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 TRAV8-1A0A0A6YYK1 113 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 IGHV1-69-2A0A0G2JMI3 117 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 IGLC2P0DOY2 106 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 IGLC3P0DOY3 106 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 TIMM23BQ5SRD1 257 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 SAMD13Q5VXD3 122 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 MRPL52Q86TS9 123 aaKnown RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 ZNF418Q8TF45 676 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-209ENST00000513761 C5orf30Q96GV9 206 aa6.38□□□□□ -1.39
CLCN3-209ENST00000513761 IGHV1-18A0A0C4DH31 117 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 COLCA1Q6ZS62 124 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 Q6ZVH6 145 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 EXOC3-AS1Q8N2X6 119 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 LSM4Q9Y4Z0 139 aaKnown RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 LY96Q9Y6Y9 160 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 INTS1Q8N201 2190 aaKnown RBP6.37□□□□□ -1.39
CLCN3-209ENST00000513761 OR11H12B2RN74 326 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 SYS1-DBNDD2H3BUS1 97 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 MLNRO43193 412 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 NUPR1O60356 82 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 OR11H1Q8NG94 326 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 OR11H2Q8NH07 326 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 ASCL2Q99929 193 aa6.37□□□□□ -1.39
CLCN3-209ENST00000513761 OTORQ9NRC9 128 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms