RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 TMEM41BQ5BJD5 291 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 RNASE12Q5GAN4 147 aaKnown RBP6.9□□□□□ -1.3
TCOF1-212ENST00000513538 RNASE10Q5GAN6 216 aaKnown RBP6.9□□□□□ -1.3
TCOF1-212ENST00000513538 CLVS1Q8IUQ0 354 aaPredicted RBP6.9□□□□□ -1.3
TCOF1-212ENST00000513538 RAB2BQ8WUD1 216 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 C15orf40Q8WUR7 153 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 BCL7BQ9BQE9 202 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 U3KQE9 123 aa6.9□□□□□ -1.3
TCOF1-212ENST00000513538 HSPG2P98160 4391 aa6.9□□□□□ -1.31
TCOF1-212ENST00000513538 IGLV2-18A0A075B6J9 118 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 A0A0B4J293 547 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 INS-IGF2F8WCM5 200 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 CTDSPLO15194 276 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 PI3P19957 117 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 TAS2R19P59542 299 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 ERHP84090 104 aaKnown RBP6.89□□□□□ -1.31
TCOF1-212ENST00000513538 TIGITQ495A1 244 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 PSMG4Q5JS54 123 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 TERB2Q8NHR7 220 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 METTL26Q96S19 204 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 RAB40CQ96S21 281 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 TP53RKQ96S44 253 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 SOSTQ9BQB4 213 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 NDUFAF3Q9BU61 184 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 SLIRPQ9GZT3 109 aaKnown RBP6.89□□□□□ -1.31
TCOF1-212ENST00000513538 TMEM231Q9H6L2 316 aa6.89□□□□□ -1.31
TCOF1-212ENST00000513538 A0A0G2JRQ6 117 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 C3orf85A0A1B0GTC6 90 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 A0A1W2PS18 150 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 CLN5O75503 358 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 RAB3DO95716 219 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 UCP1P25874 307 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 RPL5P46777 297 aaKnown RBP6.88□□□□□ -1.31
TCOF1-212ENST00000513538 PIGPP57054 158 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 MRPS10P82664 201 aaKnown RBP6.88□□□□□ -1.31
TCOF1-212ENST00000513538 STEAP1BQ6NZ63 245 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 Q6ZRM9 215 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 SLC35G3Q8N808 338 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 SMIM4Q8WVI0 70 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 GLMPQ8WWB7 406 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 RTBDNQ9BSG5 229 aaPredicted RBP6.88□□□□□ -1.31
TCOF1-212ENST00000513538 CCDC59Q9P031 241 aaKnown RBP6.88□□□□□ -1.31
TCOF1-212ENST00000513538 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
TCOF1-212ENST00000513538 HELTA6NFD8 242 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 H3BMM0 161 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 H3BMQ9 156 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 GSTZ1O43708 216 aaPredicted RBP6.87□□□□□ -1.31
TCOF1-212ENST00000513538 ETV6P41212 452 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
TCOF1-212ENST00000513538 DEFB1P60022 68 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 DHRS2Q13268 280 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 BSXQ3C1V8 233 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 AARDQ4LEZ3 155 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 GDF5OSQ5U4N7 250 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 FAAP20Q6NZ36 180 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 C16orf54Q6UWD8 224 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 ZNF705AQ6ZN79 300 aaPredicted RBP6.87□□□□□ -1.31
TCOF1-212ENST00000513538 OR13C8Q8NGS7 320 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 OR4X1Q8NH49 305 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 ZFAND1Q8TCF1 268 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 MARCH1Q8TCQ1 289 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 RABL2AQ9UBK7 228 aaPredicted RBP6.87□□□□□ -1.31
TCOF1-212ENST00000513538 RABL2BQ9UNT1 228 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 GPR132Q9UNW8 380 aa6.87□□□□□ -1.31
TCOF1-212ENST00000513538 ANKRD20A5PA0PJZ0 165 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 FAM90A26D6RGX4 464 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 CORTO00230 105 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 RGS5O15539 181 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 CDS2O95674 445 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 IGLC1P0CG04 106 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 PGAM2P15259 253 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 SNCAP37840 140 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 OPRK1P41145 380 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 HOXA1P49639 335 aaPredicted RBP6.86□□□□□ -1.31
TCOF1-212ENST00000513538 MEF2DQ14814 521 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 SURF2Q15527 256 aaPredicted RBP6.86□□□□□ -1.31
TCOF1-212ENST00000513538 USF2Q15853 346 aaPredicted RBP6.86□□□□□ -1.31
TCOF1-212ENST00000513538 SP6Q3SY56 376 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 CENPSQ8N2Z9 138 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 OR4C16Q8NGL9 310 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 LHFPL5Q8TAF8 219 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 GLYATL2Q8WU03 294 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 TMEM230Q96A57 120 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 DIRAS2Q96HU8 199 aa6.86□□□□□ -1.31
TCOF1-212ENST00000513538 ZNF705FA8MVS1 300 aaPredicted RBP6.85□□□□□ -1.31
TCOF1-212ENST00000513538 B3GALNT1O75752 331 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 IFNA10P01566 189 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 IFNA17P01571 189 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 HNRNPCP07910 306 aaKnown RBP eCLIP6.85□□□□□ -1.31
TCOF1-212ENST00000513538 ZNF705DP0CH99 300 aaPredicted RBP6.85□□□□□ -1.31
TCOF1-212ENST00000513538 ZNF705BP0CI00 300 aaPredicted RBP6.85□□□□□ -1.31
TCOF1-212ENST00000513538 HLA-DRB4P13762 266 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 TNFSF8P32971 234 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 RND2P52198 227 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 EMP1P54849 157 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 FXYD7P58549 80 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 SCGB2B2Q4G0G5 96 aa6.85□□□□□ -1.31
TCOF1-212ENST00000513538 PRSS54Q6PEW0 395 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms