RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 FAM89BQ8N5H3 189 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 OR11H7Q8NGC8 314 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 IGHV3OR16-8A0A075B7F1 116 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 TRBV7-9A0A0J9YWB2 115 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 SYNJ2BPP57105 145 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 SRSF4Q08170 494 aaKnown RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 MRPL18Q9H0U6 180 aaKnown RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 AURKAIP1Q9NWT8 199 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 EPDR1Q9UM22 224 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 TRBV6-6A0A0A6YYG2 114 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 LY6G6EA0A0G2JKS1 128 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 H0YJW9 148 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 RHODO00212 210 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 FHITP49789 147 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 ZNF138P52744 262 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 ZNF324BQ6AW86 544 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 U3KQA8 63 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 DOCK5Q9H7D0 1870 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 LYPD3O95274 346 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 TBX6O95947 436 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 CGAP01215 116 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 PRB3Q04118 309 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 SS18Q15532 418 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 ORMDL2Q53FV1 153 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 FOXB2Q5VYV0 432 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 OR10W1Q8NGF6 305 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 CYSLTR1Q9Y271 337 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 PATJQ8NI35 1801 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 GRIFINA4D1Z8 144 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 DIRC3C9JPN6 131 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 DEFB131AP59861 70 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 RUSC1-AS1Q66K80 236 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 IGFL2Q6UWQ7 119 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 C1orf122Q6ZSJ8 110 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 ORMDL3Q8N138 153 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 KLK5Q9Y337 293 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 FBLN7Q53RD9 439 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 LYPD2Q6UXB3 125 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 LYPD1Q8N2G4 141 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 SFRP2Q96HF1 295 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 MRPL27Q9P0M9 148 aaKnown RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 DICER1Q9UPY3 1922 aaKnown RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 F5H768 121 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 CXCL3P19876 107 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 C21orf62-AS1Q17RA5 79 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 MORN3Q6PF18 240 aaPredicted RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 MIR17HGQ75NE6 70 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 LRRC75A-AS1Q8N1F1 130 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 C12orf57Q99622 126 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 SEPSECSQ9HD40 501 aaKnown RBP3.48□□□□□ -1.85
VCAN-209ENST00000513016 JKAMPQ9P055 326 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 THSD7BQ9C0I4 1608 aa3.48□□□□□ -1.85
VCAN-209ENST00000513016 TOMM40O96008 361 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 SRSF1Q07955 248 aaKnown RBP eCLIP3.47□□□□□ -1.85
VCAN-209ENST00000513016 LINC01559Q495D7 138 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 MAPK1IP1LQ8NDC0 245 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 OR5A1Q8NGJ0 315 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 C7orf71A4D174 169 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 HOXA3O43365 443 aaPredicted RBP3.47□□□□□ -1.85
VCAN-209ENST00000513016 C18orf12Q96KH6 178 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 UBE2E2Q96LR5 201 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 PARLQ9H300 379 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 PGPEP1Q9NXJ5 209 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 VPREB3Q9UKI3 123 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 TRAV34A0A0B4J273 112 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 DANCRP0C864 163 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 CD28P10747 220 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 C1QL4Q86Z23 238 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 PAQR4Q8N4S7 273 aaPredicted RBP3.47□□□□□ -1.85
VCAN-209ENST00000513016 PHLDA1Q8WV24 401 aaPredicted RBP3.47□□□□□ -1.85
VCAN-209ENST00000513016 ST6GALNAC6Q969X2 333 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 IL36BQ9NZH7 164 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 H7C2G1 150 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 NDUFB8O95169 186 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 CLPSP04118 112 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 DNLZQ5SXM8 178 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 RASL10AQ92737 203 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 RP1L1Q8IWN7 2480 aaPredicted RBP3.47□□□□□ -1.85
VCAN-209ENST00000513016 THADAQ6YHU6 1953 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 F8WEM9 126 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 TDGF1P3P51864 188 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 ZNF506Q5JVG8 444 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 DLX4Q92988 240 aaPredicted RBP3.47□□□□□ -1.85
VCAN-209ENST00000513016 APC2O95996 2303 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 RALGAPA2Q2PPJ7 1873 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 MPZP25189 248 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 SRIP30626 198 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 ZNF414Q96IQ9 312 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 WDR83OSQ9Y284 106 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 CABIN1Q9Y6J0 2220 aa3.47□□□□□ -1.85
VCAN-209ENST00000513016 IGKV1-9A0A0C4DH69 117 aa3.46□□□□□ -1.85
VCAN-209ENST00000513016 LOC107984156A0A0G2JMH3 177 aa3.46□□□□□ -1.85
VCAN-209ENST00000513016 FCN3O75636 299 aa3.46□□□□□ -1.85
VCAN-209ENST00000513016 CGB3P0DN86 165 aa3.46□□□□□ -1.85
VCAN-209ENST00000513016 SELLP14151 372 aa3.46□□□□□ -1.85
VCAN-209ENST00000513016 PSG3Q16557 428 aa3.46□□□□□ -1.85
VCAN-209ENST00000513016 ARL17AQ8IVW1 177 aa3.46□□□□□ -1.85
VCAN-209ENST00000513016 LINC00311Q8N616 119 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms