RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 IGHV3-11P01762 117 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 OR10J1P30954 320 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 EIF5AL1Q6IS14 154 aaKnown RBP8.14□□□□□ -1.11
LINC01550-203ENST00000512901 THAP8Q8NA92 274 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 ZNF502Q8TBZ5 544 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 TXN2Q99757 166 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 SH3BGRL3Q9H299 93 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 ARV1Q9H2C2 271 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 GAR1Q9NY12 217 aaKnown RBP8.14□□□□□ -1.11
LINC01550-203ENST00000512901 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
LINC01550-203ENST00000512901 RNF114Q9Y508 228 aa8.14□□□□□ -1.11
LINC01550-203ENST00000512901 IGKV1OR2-108A0A075B7D4 117 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 TRAV30A0A087WSZ9 112 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 CLPSL1A2RUU4 121 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 OR2T8A6NH00 312 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 RPLP1P05386 114 aaKnown RBP8.13□□□□□ -1.11
LINC01550-203ENST00000512901 MDKP21741 143 aaPredicted RBP8.13□□□□□ -1.11
LINC01550-203ENST00000512901 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 OR2G3Q8NGZ4 309 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 TMED6Q8WW62 240 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 MGST2Q99735 147 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 KCNIP2Q9NS61 270 aa8.13□□□□□ -1.11
LINC01550-203ENST00000512901 SETD2Q9BYW2 2564 aaPredicted RBP8.13□□□□□ -1.11
LINC01550-203ENST00000512901 TCRBV4S1A1TA0A5B7 111 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 GPR183P32249 361 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 ALKAL2Q6UX46 152 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 CLEC19AQ6UXS0 136 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 GGTLC1Q9BX51 225 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 UBQLN2Q9UHD9 624 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 TIMM9Q9Y5J7 89 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 IGKV1D-37A0A075B6S9 117 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
LINC01550-203ENST00000512901 IFNA7P01567 189 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 CLEC3BP05452 202 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 FABP1P07148 127 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 SEC11BP0C7V7 166 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 IGLC1P0CG04 106 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 SPP1P10451 314 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 FCGR2BP31994 310 aaPredicted RBP8.12□□□□□ -1.11
LINC01550-203ENST00000512901 TIGITQ495A1 244 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 TMEM182Q6ZP80 229 aaPredicted RBP8.12□□□□□ -1.11
LINC01550-203ENST00000512901 CYP2G1PQ6ZSU1 146 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 PHYHIPLQ96FC7 376 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 CCDC140Q96MF4 163 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 OR5B12Q96R08 314 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 TRGV9Q99603 122 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 PSMG3Q9BT73 122 aaPredicted RBP8.12□□□□□ -1.11
LINC01550-203ENST00000512901 GNB4Q9HAV0 340 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 RFNGQ9Y644 331 aa8.12□□□□□ -1.11
LINC01550-203ENST00000512901 F8W735 103 aaPredicted RBP8.11□□□□□ -1.11
LINC01550-203ENST00000512901 ELLP55199 621 aaPredicted RBP8.11□□□□□ -1.11
LINC01550-203ENST00000512901 SELENOTP62341 195 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 ZNF90Q03938 601 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 MIC13Q5XKP0 118 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 STPG3Q8N7X2 389 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.11□□□□□ -1.11
LINC01550-203ENST00000512901 ZNF491Q8N8L2 437 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 BPIFCQ8NFQ6 507 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 PXMP4Q9Y6I8 212 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 A0A1B0GUS0 222 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 TEX46H3BTG2 121 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 GATA2P23769 480 aaPredicted RBP8.11□□□□□ -1.11
LINC01550-203ENST00000512901 ARL3P36405 182 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
LINC01550-203ENST00000512901 B2MP61769 119 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 ZNF616Q08AN1 781 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 FFAR4Q5NUL3 377 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 AKR1C8PQ5T2L2 129 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 C11orf44Q8N8P7 122 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 UBE2E2Q96LR5 201 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 ATP6V0BQ99437 205 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 SLC45A2Q9UMX9 530 aa8.11□□□□□ -1.11
LINC01550-203ENST00000512901 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.1□□□□□ -1.11
LINC01550-203ENST00000512901 LINC00862A6NCI5 91 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 TGOLN2O43493 480 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 TSPAN15O95858 294 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 IGKV1-17P01599 117 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 CTSGP08311 255 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 PROK1P58294 105 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 SERF2P84101 59 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 FAM209BQ5JX69 171 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 ZNF343Q6P1L6 599 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 SPSB3Q6PJ21 355 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 Q6ZRG5 221 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 MYOZ3Q8TDC0 251 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 SLC39A9Q9NUM3 307 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 PPP5D1E7EU14 171 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 LINC00869P0C866 280 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 RD3LP0DJH9 198 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 FOXL1Q12952 345 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 KIAA0141Q14154 515 aaPredicted RBP8.1□□□□□ -1.11
LINC01550-203ENST00000512901 CLLU1Q5K131 121 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 FAM74A1Q5RGS3 127 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 COMMD7Q86VX2 200 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 WIPF2Q8TF74 440 aaPredicted RBP8.1□□□□□ -1.11
LINC01550-203ENST00000512901 Q8WTZ3 238 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 CHRDL1Q9BU40 450 aa8.1□□□□□ -1.11
LINC01550-203ENST00000512901 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
LINC01550-203ENST00000512901 IGHV3-35A0A0C4DH35 117 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms