RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
USP46-208ENST00000512656 DNAH10Q8IVF4 4471 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 FAM25AB3EWG3 89 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 FAM25CB3EWG5 89 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 FAM25GB3EWG6 89 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 C11orf94C9JXX5 98 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 M0QYG6 137 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 TMEM50AO95807 157 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 ELK1P19419 428 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 RORCP51449 518 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 PIGPP57054 158 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 NANOS2P60321 138 aaKnown RBP5.25□□□□□ -1.57
USP46-208ENST00000512656 TRIM16LQ309B1 348 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 RNASE11Q8TAA1 199 aaKnown RBP5.25□□□□□ -1.57
USP46-208ENST00000512656 GRAMD2BQ96HH9 432 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 ZNF414Q96IQ9 312 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 COPZ2Q9P299 210 aa5.25□□□□□ -1.57
USP46-208ENST00000512656 TRAV30A0A087WSZ9 112 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 A0A0B4J293 547 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 IGHV3-66A0A0C4DH42 116 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 C3orf85A0A1B0GTC6 90 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 RPS10-NUDT3A0A1W2PQS6 291 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 GAGE12HA6NDE8 117 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 DIRC3C9JPN6 131 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 HPGDSO60760 199 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 CLN5O75503 358 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 IGKV1-5P01602 117 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 APOHP02749 345 aaPredicted RBP5.24□□□□□ -1.57
USP46-208ENST00000512656 P0C879 139 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 RNASE2P10153 161 aaKnown RBP5.24□□□□□ -1.57
USP46-208ENST00000512656 SPP1P10451 314 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 CRYBB3P26998 211 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 OPRK1P41145 380 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 RPL5P46777 297 aaKnown RBP5.24□□□□□ -1.57
USP46-208ENST00000512656 SPINK9Q5DT21 86 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 LEMD1Q68G75 181 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 PVRIGQ6DKI7 326 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 MORN3Q6PF18 240 aaPredicted RBP5.24□□□□□ -1.57
USP46-208ENST00000512656 LHFPL1Q86WI0 220 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 FAM219AQ8IW50 185 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 RPP25LQ8N5L8 163 aaKnown RBP5.24□□□□□ -1.57
USP46-208ENST00000512656 STXBP6Q8NFX7 210 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 OR4X1Q8NH49 305 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 TMEM230Q96A57 120 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 FUNDC2Q9BWH2 189 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 HRH4Q9H3N8 390 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 CACFD1Q9UGQ2 172 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 DNAH6Q9C0G6 4158 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
USP46-208ENST00000512656 A0A1B0GU03 582 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 HELTA6NFD8 242 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 K7EQG2 157 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 DEDDO75618 318 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 CD3DP04234 171 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 SLC25A4P12235 298 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 MIFP14174 115 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 ETV6P41212 452 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 HTR2BP41595 481 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 P2RY1P47900 373 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 AP2S1P53680 142 aaPredicted RBP5.23□□□□□ -1.57
USP46-208ENST00000512656 SPCS3P61009 180 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 VBP1P61758 197 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 NCS1P62166 190 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 IZUMO4Q1ZYL8 232 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 NOXA1Q86UR1 476 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 OR52I2Q8NH67 350 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 TERB2Q8NHR7 220 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 Q8WTZ3 238 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 TP53RKQ96S44 253 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 HEYLQ9NQ87 328 aaPredicted RBP5.23□□□□□ -1.57
USP46-208ENST00000512656 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.23□□□□□ -1.57
USP46-208ENST00000512656 MTFP1Q9UDX5 166 aa5.23□□□□□ -1.57
USP46-208ENST00000512656 C14orf166Q9Y224 244 aaKnown RBP5.23□□□□□ -1.57
USP46-208ENST00000512656 TEX13DA0A0J9YY54 714 aaPredicted RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 IGLL5B9A064 214 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 DEFB4AO15263 64 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 RAB3DO95716 219 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 ZNF688P0C7X2 276 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 ZNF182P17025 639 aaPredicted RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 UCP1P25874 307 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 PPP5CP53041 499 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 TAS2R19P59542 299 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 NUTF2P61970 127 aaKnown RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 MRPS10P82664 201 aaKnown RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 SSBP1Q04837 148 aaKnown RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 MEF2DQ14814 521 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 BSXQ3C1V8 233 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 SP6Q3SY56 376 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 SCGB2B2Q4G0G5 96 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 RNASE12Q5GAN4 147 aaKnown RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 ETFRF1Q6IPR1 90 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 TRPT1Q86TN4 253 aaKnown RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 TMEM229BQ8NBD8 167 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 OR1S2Q8NGQ3 325 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 OR13C8Q8NGS7 320 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 OR52E5Q8NH55 327 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 RNASEH2CQ8TDP1 164 aaKnown RBP5.22□□□□□ -1.57
USP46-208ENST00000512656 ABHD1Q96SE0 405 aa5.22□□□□□ -1.57
USP46-208ENST00000512656 C1QTNF4Q9BXJ3 329 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms