RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 RPP25LQ8N5L8 163 aaKnown RBP4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF519Q8TB69 540 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 TAF15Q92804 592 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 TMEM106AQ96A25 262 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 VOPP1Q96AW1 172 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 SMIM14Q96QK8 99 aa4.68□□□□□ -1.66
TRAPPC11-209ENST00000512476 KIF26AQ9ULI4 1882 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 MYO7AQ13402 2215 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR51F1A6NGY5 319 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 CXCL1P09341 107 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 CHTF8P0CG12 524 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 CRHBPP24387 322 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 FOXA3P55318 350 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 RPL26P61254 145 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 ERVK-16P61578 105 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF429Q86V71 674 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR2T10Q8NGZ9 312 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 RAB2BQ8WUD1 216 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 FAM168AQ92567 244 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 TMEM133Q9H2Q1 129 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 PRO3102Q9H379 93 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 AIG1Q9NVV5 245 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 RPL26L1Q9UNX3 145 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 CHD7Q9P2D1 2997 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 PIKFYVEQ9Y2I7 2098 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 CHD9Q3L8U1 2897 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 IGKV1-12A0A0C4DH73 117 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 IGLV5-39A0A0G2JS06 123 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 FNDC10F2Z333 226 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 PLXNB1O43157 2135 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 IGKV1D-12P01611 117 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 NFYBP25208 207 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 ATP6V0CP27449 155 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 TGFBR1P36897 503 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 RBMXP38159 391 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 LINC00205P59089 165 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 MRPL2Q5T653 305 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 LCN15Q6UWW0 184 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 Q6ZS49 121 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 NFE4Q86UQ8 179 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 GNPNAT1Q96EK6 184 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 PLA2G2FQ9BZM2 168 aa4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF443Q9Y2A4 671 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-209ENST00000512476 ANKRD36A6QL64 1941 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 DIDO1Q9BTC0 2240 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 FANCMQ8IYD8 2048 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 IGHV4OR15-8A0A075B7B6 117 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 PHOX2AO14813 284 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 TAX1BP3O14907 124 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 APODP05090 189 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 CTSEP14091 401 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 IMPA1P29218 277 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR10J1P30954 320 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF80P51504 273 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 LRP11Q86VZ4 500 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 NUP35Q8NFH5 326 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 CCL13Q99616 98 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 WDR61Q9GZS3 305 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 MYOFQ9NZM1 2061 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 TET2Q6N021 2002 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 TRBV20OR9-2A0A075B6H5 130 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 A0A0G2JMM0 328 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 A0A1W2PPB8 328 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 DPRXA6NFQ7 191 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 KIR3DP1A8MWS1 328 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 TMEM250H0YL14 139 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 J3QRK9 145 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 IFNA7P01567 189 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 CD14P08571 375 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 AQP4P55087 323 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF709Q8N972 641 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 PLPP5Q8NEB5 264 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 MRPL30Q8TCC3 161 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 ELSPBP1Q96BH3 223 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 COMMD5Q9GZQ3 224 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 DEC1Q9P2X7 70 aa4.66□□□□□ -1.66
TRAPPC11-209ENST00000512476 MUC22E2RYF6 1773 aaPredicted RBP4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 KIAA1549LQ6ZVL6 1849 aa4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 LAMA2P24043 3122 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 BBIP1A8MTZ0 92 aa4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 ZNF73O43830 326 aaPredicted RBP4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 EDF1O60869 148 aaKnown RBP4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 SPINK8P0C7L1 97 aa4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 OPRM1P35372 400 aa4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 LAIR2Q6ISS4 152 aa4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 CGB2Q6NT52 195 aa4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 OR8D4Q8NGM9 314 aa4.65□□□□□ -1.66
TRAPPC11-209ENST00000512476 MYO10Q9HD67 2058 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 TRAV9-2A0A087WT02 112 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 LINC01548A6NM66 108 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 WISP3O95389 354 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 IGHV3-48P01763 117 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 TCRAP04437 139 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 SSX8Q7RTT4 187 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 TRAPPC6BQ86SZ2 158 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 LINC00311Q8N616 119 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 TMEM252Q8N6L7 170 aa4.65□□□□□ -1.67
TRAPPC11-209ENST00000512476 ZNF580Q9UK33 172 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms