RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 KISS1Q15726 138 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 SPANXN3Q5MJ09 141 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 ZNF678Q5SXM1 525 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 TTC9CQ8N5M4 171 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 SCRT2Q9NQ03 307 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 MPC1Q9Y5U8 109 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 TROQ12816 1431 aaPredicted RBP4.36□□□□□ -1.71
CHD1-208ENST00000512392 KDM5CP41229 1560 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 DENND4CQ5VZ89 1909 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 CEP164Q9UPV0 1460 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 IGLV7-46A0A075B6I9 117 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 OR2T8A6NH00 312 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 TNFP01375 233 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 SRP14P37108 136 aaKnown RBP4.35□□□□□ -1.71
CHD1-208ENST00000512392 TAS2R45P59539 299 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 FAM182AQ5T1J6 154 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 BPIFA4PQ86YQ2 179 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 TMEM256Q8N2U0 113 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 OR8A1Q8NGG7 326 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 LCN9Q8WX39 176 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 PLA2G2FQ9BZM2 168 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 QRICH2Q9H0J4 1663 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 NUP210LQ5VU65 1888 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 ANKRD36BQ8N2N9 1353 aa4.35□□□□□ -1.71
CHD1-208ENST00000512392 GPATCH8Q9UKJ3 1502 aaKnown RBP4.34□□□□□ -1.71
CHD1-208ENST00000512392 IGHV3OR15-7A0A075B7D8 119 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 TRBV27A0A0K0K1C4 114 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 SMIM31A0A1B0GVY4 71 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 LEPROTO15243 131 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 UBA52P62987 128 aaKnown RBP4.34□□□□□ -1.71
CHD1-208ENST00000512392 FAM74A1Q5RGS3 127 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 GINS4Q9BRT9 223 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 RERGLQ9H628 205 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 RPRMQ9NS64 109 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 TRIP11Q15643 1979 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 IGHV7-4-1A0A0J9YVY3 117 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 A0A1B0GVX0 72 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 PHOX2AO14813 284 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 PITX3O75364 302 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 TLX1NBP0CAT3 122 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 HLA-DMBP28068 263 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 EIF5AP63241 154 aaKnown RBP4.34□□□□□ -1.71
CHD1-208ENST00000512392 ZFP62Q8NB50 900 aaPredicted RBP4.34□□□□□ -1.71
CHD1-208ENST00000512392 DUSP21Q9H596 190 aa4.34□□□□□ -1.71
CHD1-208ENST00000512392 KLK5Q9Y337 293 aaPredicted RBP4.34□□□□□ -1.71
CHD1-208ENST00000512392 CRB1P82279 1406 aa4.34□□□□□ -1.72
CHD1-208ENST00000512392 PCNX3Q9H6A9 2034 aa4.34□□□□□ -1.72
CHD1-208ENST00000512392 TOPBP1Q92547 1522 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 CARMIL3Q8ND23 1372 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 ANKRD26Q9UPS8 1709 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 FRMPD1Q5SYB0 1578 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 IGHV5-10-1A0A0J9YXX1 117 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 HLA-DRB4P13762 266 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 MRPL54Q6P161 138 aaKnown RBP4.33□□□□□ -1.72
CHD1-208ENST00000512392 TMEM91Q6ZNR0 172 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 C1orf147Q96MC9 270 aaPredicted RBP4.33□□□□□ -1.72
CHD1-208ENST00000512392 SEC11CQ9BY50 192 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 LSM2Q9Y333 95 aaKnown RBP4.33□□□□□ -1.72
CHD1-208ENST00000512392 LINC00588Q9Y4M8 146 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 HLA-DRB4X5D2U9 266 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 IGHV3-43A0A0B4J1X8 118 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 IGHV5-51A0A0C4DH38 117 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 IGHV3-66A0A0C4DH42 116 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 NDUFB3O43676 98 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 TEN1Q86WV5 123 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 FGFBP2Q9BYJ0 223 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 ZNF581Q9P0T4 197 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 DNAJC15Q9Y5T4 150 aa4.33□□□□□ -1.72
CHD1-208ENST00000512392 SCN2AQ99250 2005 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 N4BP2Q86UW6 1770 aaPredicted RBP4.32□□□□□ -1.72
CHD1-208ENST00000512392 TRIP12Q14669 1992 aaPredicted RBP4.32□□□□□ -1.72
CHD1-208ENST00000512392 ANKRD31Q8N7Z5 1873 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 GEMIN2O14893 280 aaKnown RBP4.32□□□□□ -1.72
CHD1-208ENST00000512392 PMP2P02689 132 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 APCSP02743 223 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 TRGC1P0CF51 173 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 PYYP10082 97 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 IFITM1P13164 125 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 MRPL51Q4U2R6 128 aaKnown RBP4.32□□□□□ -1.72
CHD1-208ENST00000512392 AMTNQ6UX39 209 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 Q8N377 158 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 CD177Q8N6Q3 437 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 ZNF525Q8N782 197 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 MORN4Q8NDC4 146 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 VGLL1Q99990 258 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 FKBP11Q9NYL4 201 aa4.32□□□□□ -1.72
CHD1-208ENST00000512392 NCKAP5O14513 1909 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 ZNF432O94892 652 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 MT-ND6P03923 174 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 TSPEAR-AS2P59090 65 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 NANOS2P60321 138 aaKnown RBP4.31□□□□□ -1.72
CHD1-208ENST00000512392 IGFL3Q6UXB1 125 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 C10orf126Q8N4M7 172 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 OR10P1Q8NGE3 313 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 OR4B1Q8NGF8 309 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
CHD1-208ENST00000512392 RMI2Q96E14 147 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms