RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FABP3P05413 133 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 GNAO1P09471 354 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 S100A5P33763 92 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 CEACAM6P40199 344 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 HAAOP46952 286 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 EDDM3BP56851 147 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 MTPNP58546 118 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 CD164Q04900 197 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 PRKCDQ05655 676 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 MEF2CQ06413 473 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 ENDOGQ14249 297 aaKnown RBP2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF266Q14584 549 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 COQ5Q5HYK3 327 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 CLEC19AQ6UXS0 136 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 Q6ZSA8 131 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 TCF24Q7RTU0 167 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 FAM19A1Q7Z5A9 133 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 SLC7A5P1Q8MH63 180 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 CYB561D1Q8N8Q1 229 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 OR8J2Q8NGG1 315 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 OR5J2Q8NH18 312 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 OR1S1Q8NH92 325 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 CASTOR1Q8WTX7 329 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 ROPN1LQ96C74 230 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 APOL4Q9BPW4 351 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 CHAC1Q9BUX1 264 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 TLNRD1Q9H1K6 362 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 ARV1Q9H2C2 271 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 C12orf10Q9HB07 376 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 ABCB9Q9NP78 766 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 SPANXB1Q9NS25 103 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 TFR2Q9UP52 801 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 PSG8Q9UQ74 426 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 ERGIC3Q9Y282 383 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 SNX24Q9Y343 169 aa2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 AMMECR1Q9Y4X0 333 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 POLR3HQ9Y535 204 aaPredicted RBP2.05□□□□□ -2.08
TOPBP1-208ENST00000511439 IGKV2-28A0A075B6P5 120 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 A0A1B0GVX0 72 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 A0A1B0GX12 115 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 hADV38S2A0JD32 116 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 TRAPPC13A5PLN9 417 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 TMEM210A6NLX4 147 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF850A8MQ14 1090 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 H7C1H1 209 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 FABP7O15540 132 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 HAND1O96004 215 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 IGKV2D-28P01615 120 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 HLA-AP01891 365 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 DBIP07108 87 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 MAP2K4P45985 399 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 GALR1P47211 349 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 RPL14P50914 215 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 ZNF138P52744 262 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 FMODQ06828 376 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 FADDQ13158 208 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 EIF4EBP1Q13541 118 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 RAB31Q13636 194 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 OR1Q1Q15612 314 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 TRAM1Q15629 374 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 CDNFQ49AH0 187 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 LIN52Q52LA3 116 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 SAPCD1Q5SSQ6 148 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 ZCCHC23Q6ZST2 131 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 SCXQ7RTU7 201 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 H1FOOQ8IZA3 346 aaPredicted RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 Q8N6K4 173 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 ZFP41Q8N8Y5 198 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 C11orf72Q8NBR9 251 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 LFNGQ8NES3 379 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 OR5T1Q8NG75 326 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 OR10G2Q8NGC3 310 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 OR11H7Q8NGC8 314 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 OR2T10Q8NGZ9 312 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 RNASEH2CQ8TDP1 164 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 CMTM5Q96DZ9 223 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 SLC35G5Q96KT7 338 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 SLIRPQ9GZT3 109 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 NXF2Q9GZY0 626 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 CST11Q9H112 138 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 OR51I1Q9H343 314 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 HMG20AQ9NP66 347 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 IFT46Q9NQC8 304 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 MTFP1Q9UDX5 166 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 PCTPQ9UKL6 214 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 LINC00312Q9Y6C7 94 aa2.04□□□□□ -2.08
TOPBP1-208ENST00000511439 IGKV1D-42A0A075B6H8 117 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 IGKV1D-43A0A0B4J1Z2 117 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 IGLV2-8P01709 118 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 TRGV3P03979 118 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 HIST1H1CP16403 213 aaKnown RBP2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 CEBPGP53567 150 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 FUT5Q11128 374 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 IMPG1Q17R60 797 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 SMIM21Q3B7S5 101 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 ACOT6Q3I5F7 207 aaPredicted RBP2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 ORMDL2Q53FV1 153 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 LINC00483Q53H64 154 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 METTL21CQ5VZV1 264 aa2.03□□□□□ -2.08
TOPBP1-208ENST00000511439 MORN3Q6PF18 240 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms