RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SLC25A4P12235 298 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 ANXA3P12429 323 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 S100A5P33763 92 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 CCR6P51684 374 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 RND2P52198 227 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 SRPXP78539 464 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 SMCO1Q147U7 214 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 ZNF79Q15937 498 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 LGI3Q8N145 548 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 RNF183Q96D59 192 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 LYSTQ99698 3801 aa16.95■□□□□ 0.3
SNF8-209ENST00000510558 IGLC1P0CG04 106 aa16.94■□□□□ 0.3
SNF8-209ENST00000510558 CRYBB3P26998 211 aa16.94■□□□□ 0.3
SNF8-209ENST00000510558 RPL11P62913 178 aaKnown RBP16.94■□□□□ 0.3
SNF8-209ENST00000510558 TNFRSF9Q07011 255 aa16.94■□□□□ 0.3
SNF8-209ENST00000510558 OR1S2Q8NGQ3 325 aa16.94■□□□□ 0.3
SNF8-209ENST00000510558 RBM38Q9H0Z9 239 aaKnown RBP16.94■□□□□ 0.3
SNF8-209ENST00000510558 HSPB7Q9UBY9 170 aa16.94■□□□□ 0.3
SNF8-209ENST00000510558 TRAV2A0A0B4J234 112 aa16.93■□□□□ 0.3
SNF8-209ENST00000510558 A0A0J9YWU9 116 aa16.93■□□□□ 0.3
SNF8-209ENST00000510558 OR10J1P30954 320 aa16.93■□□□□ 0.3
SNF8-209ENST00000510558 TMED4Q7Z7H5 227 aa16.93■□□□□ 0.3
SNF8-209ENST00000510558 LYG2Q86SG7 212 aa16.93■□□□□ 0.3
SNF8-209ENST00000510558 NOXA1Q86UR1 476 aa16.93■□□□□ 0.3
SNF8-209ENST00000510558 IFNA10P01566 189 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 P2RY1P47900 373 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 ETFRF1Q6IPR1 90 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 CCDC190Q86UF4 302 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 DTD1Q8TEA8 209 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 NARS2Q96I59 477 aaKnown RBP16.92■□□□□ 0.3
SNF8-209ENST00000510558 CSTL1Q9H114 145 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 RBKSQ9H477 322 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 RABAC1Q9UI14 185 aa16.92■□□□□ 0.3
SNF8-209ENST00000510558 DEFB131AP59861 70 aa16.91■□□□□ 0.3
SNF8-209ENST00000510558 YPEL3P61236 119 aaPredicted RBP16.91■□□□□ 0.3
SNF8-209ENST00000510558 TMEM128Q5BJH2 165 aa16.91■□□□□ 0.3
SNF8-209ENST00000510558 FAM24BQ8N5W8 94 aa16.91■□□□□ 0.3
SNF8-209ENST00000510558 Q8WTZ3 238 aa16.91■□□□□ 0.3
SNF8-209ENST00000510558 U3KQ87 197 aa16.91■□□□□ 0.3
SNF8-209ENST00000510558 PIGBOS1A0A0B4J2F0 54 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 MPTX1A8MV57 137 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 JTBO76095 146 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 RBMS2Q15434 407 aaKnown RBP16.9■□□□□ 0.3
SNF8-209ENST00000510558 STXBP6Q8NFX7 210 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 OR1S1Q8NH92 325 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 DEDD2Q8WXF8 326 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 NPIPB3Q92617 1050 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 ACY3Q96HD9 319 aa16.9■□□□□ 0.3
SNF8-209ENST00000510558 SLC25A21Q9BQT8 299 aaPredicted RBP16.9■□□□□ 0.3
SNF8-209ENST00000510558 DUXBA0A1W2PPF3 345 aa16.89■□□□□ 0.29
SNF8-209ENST00000510558 VAMP1P23763 118 aa16.89■□□□□ 0.29
SNF8-209ENST00000510558 EWSR1Q01844 656 aaKnown RBP eCLIP16.89■□□□□ 0.29
SNF8-209ENST00000510558 LEMD1Q68G75 181 aa16.89■□□□□ 0.29
SNF8-209ENST00000510558 GRAMD2BQ96HH9 432 aa16.89■□□□□ 0.29
SNF8-209ENST00000510558 K7EQG2 157 aa16.88■□□□□ 0.29
SNF8-209ENST00000510558 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
SNF8-209ENST00000510558 U3KQE9 123 aa16.88■□□□□ 0.29
SNF8-209ENST00000510558 DNAH1Q9P2D7 4330 aa16.87■□□□□ 0.29
SNF8-209ENST00000510558 HNRNPCP07910 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNF8-209ENST00000510558 PMS2P11Q13670 270 aa16.87■□□□□ 0.29
SNF8-209ENST00000510558 SPANXN2Q5MJ10 180 aa16.87■□□□□ 0.29
SNF8-209ENST00000510558 AGRNO00468 2067 aa16.87■□□□□ 0.29
SNF8-209ENST00000510558 CXorf65A6NEN9 183 aa16.86■□□□□ 0.29
SNF8-209ENST00000510558 PITX3O75364 302 aa16.86■□□□□ 0.29
SNF8-209ENST00000510558 TOMM40O96008 361 aa16.86■□□□□ 0.29
SNF8-209ENST00000510558 IFNA4P05014 189 aa16.86■□□□□ 0.29
SNF8-209ENST00000510558 IL4P05112 153 aa16.86■□□□□ 0.29
SNF8-209ENST00000510558 USF2Q15853 346 aaPredicted RBP16.86■□□□□ 0.29
SNF8-209ENST00000510558 LRTM2Q8N967 370 aa16.86■□□□□ 0.29
SNF8-209ENST00000510558 GATAD1Q8WUU5 269 aa16.86■□□□□ 0.29
SNF8-209ENST00000510558 RD3LP0DJH9 198 aa16.85■□□□□ 0.29
SNF8-209ENST00000510558 ATF4P18848 351 aaPredicted RBP16.85■□□□□ 0.29
SNF8-209ENST00000510558 EIF2B2P49770 351 aaKnown RBP16.85■□□□□ 0.29
SNF8-209ENST00000510558 ATP5IP56385 69 aaPredicted RBP16.85■□□□□ 0.29
SNF8-209ENST00000510558 C16orf54Q6UWD8 224 aa16.85■□□□□ 0.29
SNF8-209ENST00000510558 DCANP1Q8TF63 244 aa16.85■□□□□ 0.29
SNF8-209ENST00000510558 GLMPQ8WWB7 406 aa16.85■□□□□ 0.29
SNF8-209ENST00000510558 SRRQ9GZT4 340 aa16.85■□□□□ 0.29
SNF8-209ENST00000510558 HELTA6NFD8 242 aa16.84■□□□□ 0.29
SNF8-209ENST00000510558 SFT2D2O95562 160 aa16.84■□□□□ 0.29
SNF8-209ENST00000510558 CA1P00915 261 aaPredicted RBP16.84■□□□□ 0.29
SNF8-209ENST00000510558 ZNF688P0C7X2 276 aa16.84■□□□□ 0.29
SNF8-209ENST00000510558 SLC25A6P12236 298 aa16.84■□□□□ 0.29
SNF8-209ENST00000510558 PPP1R1AQ13522 171 aa16.84■□□□□ 0.29
SNF8-209ENST00000510558 STHQ8IWL8 128 aa16.84■□□□□ 0.29
SNF8-209ENST00000510558 CENPSQ8N2Z9 138 aa16.84■□□□□ 0.29
SNF8-209ENST00000510558 IAPPP10997 89 aa16.83■□□□□ 0.28
SNF8-209ENST00000510558 PSG1P11464 419 aa16.83■□□□□ 0.28
SNF8-209ENST00000510558 TMEM217Q8N7C4 229 aa16.83■□□□□ 0.28
SNF8-209ENST00000510558 RARRES2Q99969 163 aa16.83■□□□□ 0.28
SNF8-209ENST00000510558 NUPR2A6NF83 97 aa16.82■□□□□ 0.28
SNF8-209ENST00000510558 FAM90A26D6RGX4 464 aa16.82■□□□□ 0.28
SNF8-209ENST00000510558 GPX4P36969 197 aaPredicted RBP16.82■□□□□ 0.28
SNF8-209ENST00000510558 DHRS2Q13268 280 aa16.82■□□□□ 0.28
SNF8-209ENST00000510558 SLC35E1Q96K37 410 aa16.82■□□□□ 0.28
SNF8-209ENST00000510558 TMED3Q9Y3Q3 217 aa16.82■□□□□ 0.28
SNF8-209ENST00000510558 INPP1P49441 399 aa16.81■□□□□ 0.28
SNF8-209ENST00000510558 AP2S1P53680 142 aaPredicted RBP16.81■□□□□ 0.28
SNF8-209ENST00000510558 GAMTQ14353 236 aa16.81■□□□□ 0.28
SNF8-209ENST00000510558 OR51G1Q8NGK1 321 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms