RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 IFNA10P01566 189 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 SLC25A4P12235 298 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 OR10J1P30954 320 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 BMI1P35226 326 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 RBMS2Q15434 407 aaKnown RBP13.75□□□□□ -0.21
LSM6-206ENST00000510331 CENPSQ8N2Z9 138 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 MAP6D1Q9H9H5 199 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 CACFD1Q9UGQ2 172 aa13.75□□□□□ -0.21
LSM6-206ENST00000510331 DFFBO76075 338 aa13.74□□□□□ -0.21
LSM6-206ENST00000510331 RPL35AP18077 110 aaKnown RBP13.74□□□□□ -0.21
LSM6-206ENST00000510331 INPP1P49441 399 aa13.74□□□□□ -0.21
LSM6-206ENST00000510331 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
LSM6-206ENST00000510331 OR1S2Q8NGQ3 325 aa13.74□□□□□ -0.21
LSM6-206ENST00000510331 ACY3Q96HD9 319 aa13.74□□□□□ -0.21
LSM6-206ENST00000510331 METTL26Q96S19 204 aa13.74□□□□□ -0.21
LSM6-206ENST00000510331 OVOL2Q9BRP0 275 aa13.74□□□□□ -0.21
LSM6-206ENST00000510331 LINC00854A0A1B0GVQ3 168 aa13.73□□□□□ -0.21
LSM6-206ENST00000510331 PITX3O75364 302 aa13.73□□□□□ -0.21
LSM6-206ENST00000510331 APOC4P55056 127 aa13.73□□□□□ -0.21
LSM6-206ENST00000510331 DEFB135Q30KP9 77 aa13.73□□□□□ -0.21
LSM6-206ENST00000510331 FAM24BQ8N5W8 94 aa13.73□□□□□ -0.21
LSM6-206ENST00000510331 MS4A6AQ9H2W1 248 aa13.73□□□□□ -0.21
LSM6-206ENST00000510331 TRAV30A0A087WSZ9 112 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 NDUFB6O95139 128 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 IAPPP10997 89 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 NPPCP23582 126 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 CRYBB3P26998 211 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 BTCP35070 178 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 WFDC3Q8IUB2 231 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 NPIPB3Q92617 1050 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 LYSTQ99698 3801 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 U3KQ87 197 aa13.72□□□□□ -0.21
LSM6-206ENST00000510331 P2RY1P47900 373 aa13.71□□□□□ -0.21
LSM6-206ENST00000510331 RPL11P62913 178 aaKnown RBP13.71□□□□□ -0.21
LSM6-206ENST00000510331 USF2Q15853 346 aaPredicted RBP13.71□□□□□ -0.21
LSM6-206ENST00000510331 ETFRF1Q6IPR1 90 aa13.71□□□□□ -0.21
LSM6-206ENST00000510331 NOXA1Q86UR1 476 aa13.71□□□□□ -0.21
LSM6-206ENST00000510331 TMEM231Q9H6L2 316 aa13.71□□□□□ -0.21
LSM6-206ENST00000510331 FLVCR2Q9UPI3 526 aa13.71□□□□□ -0.21
LSM6-206ENST00000510331 PIGBOS1A0A0B4J2F0 54 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 NAP1L6A6NFF2 107 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 IFNA4P05014 189 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 CD5P06127 495 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 HOXB5P09067 269 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 IL7P13232 177 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 YPEL3P61236 119 aaPredicted RBP13.7□□□□□ -0.22
LSM6-206ENST00000510331 STXBP6Q8NFX7 210 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 RABAC1Q9UI14 185 aa13.7□□□□□ -0.22
LSM6-206ENST00000510331 KIR2DL5BA0A0G2JN68 375 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 KIR2DL5BA0A0G2JPC4 375 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 A0A1W2PS18 150 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 DNASE2O00115 360 aaPredicted RBP13.69□□□□□ -0.22
LSM6-206ENST00000510331 IL4P05112 153 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 SLC25A6P12236 298 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 GGNBP1Q5YKI7 109 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 LEMD1Q68G75 181 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 KIR2DL5AQ8N109 375 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 TMED3Q9Y3Q3 217 aa13.69□□□□□ -0.22
LSM6-206ENST00000510331 TRAV2A0A0B4J234 112 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 C9orf170A2RU37 121 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 ADAP1O75689 374 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 TOMM40O96008 361 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 HNRNPCP07910 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
LSM6-206ENST00000510331 UBE2MP61081 183 aaKnown RBP13.68□□□□□ -0.22
LSM6-206ENST00000510331 Q6ZWC4 215 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 STPG3Q8N7X2 389 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 Q8WTZ3 238 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 NARS2Q96I59 477 aaKnown RBP13.68□□□□□ -0.22
LSM6-206ENST00000510331 U3KQE9 123 aa13.68□□□□□ -0.22
LSM6-206ENST00000510331 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
LSM6-206ENST00000510331 SPRY2O43597 315 aa13.67□□□□□ -0.22
LSM6-206ENST00000510331 ANXA7P20073 488 aaKnown RBP13.67□□□□□ -0.22
LSM6-206ENST00000510331 DEFB131AP59861 70 aa13.67□□□□□ -0.22
LSM6-206ENST00000510331 DHRS2Q13268 280 aa13.67□□□□□ -0.22
LSM6-206ENST00000510331 GLMPQ8WWB7 406 aa13.67□□□□□ -0.22
LSM6-206ENST00000510331 SLC35E1Q96K37 410 aa13.67□□□□□ -0.22
LSM6-206ENST00000510331 PAIP2BQ9ULR5 123 aaKnown RBP13.67□□□□□ -0.22
LSM6-206ENST00000510331 TP53TG1Q9Y2A0 90 aa13.67□□□□□ -0.22
LSM6-206ENST00000510331 IGKV1D-37A0A075B6S9 117 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 MPTX1A8MV57 137 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 K7EQG2 157 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 UBE2CO00762 179 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 RD3LP0DJH9 198 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 GAMTQ14353 236 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 GRAMD2BQ96HH9 432 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 NDUFA13Q9P0J0 144 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 AGRNO00468 2067 aa13.66□□□□□ -0.22
LSM6-206ENST00000510331 A0A0J9YWU9 116 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 ZFP92A6NM28 416 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 H3BP45 60 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 SYNGR2O43760 224 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 OR4E1P0C645 316 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 ZNF688P0C7X2 276 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 PSG1P11464 419 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
LSM6-206ENST00000510331 EWSR1Q01844 656 aaKnown RBP eCLIP13.65□□□□□ -0.22
LSM6-206ENST00000510331 ZNF90Q03938 601 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms