RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RPL22L1Q6P5R6 122 aaKnown RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 DEFB123Q8N688 67 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF418Q8TF45 676 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 GNPNAT1Q96EK6 184 aaPredicted RBP3.15□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BLQ99880 126 aa3.15□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV4-61A0A0C4DH41 118 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 LY6G6EA0A0G2JKS1 128 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 NPIPB9F8W1W9 429 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV4-59P01825 116 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 SLC25A16P16260 332 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BOP23527 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 FKBP2P26885 142 aaKnown RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BBP33778 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BDP58876 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BCP62807 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST2H2BEQ16778 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST3H2BBQ8N257 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF441Q8N8Z8 693 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 PRSS33Q8NF86 280 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BHQ93079 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BNQ99877 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BMQ99879 126 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 SRXN1Q9BYN0 137 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 KCNE3Q9Y6H6 103 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 U3KQA8 63 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 TRAV38-1A0A0B4J264 116 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 C3orf85A0A1B0GTC6 90 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 A0A1B0GVG6 124 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 NTN3O00634 580 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 PYYP10082 97 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF726P1Q15940 193 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM183BQ1AE95 376 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 KIAA1644Q3SXP7 199 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 Q56UQ5 140 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 C1orf174Q8IYL3 243 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 OR51H1Q8NH63 302 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF721Q8TF20 911 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 RTN4IP1Q8WWV3 396 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF501Q96CX3 271 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 SMIM7Q9BQ49 75 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 STARD5Q9NSY2 213 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 KLK13Q9UKR3 277 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 F11RQ9Y624 299 aaKnown RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 IFITM10A6NMD0 228 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 FOXI3A8MTJ6 420 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 FFAR1O14842 300 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 NPFFO15130 113 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 INAFM2P0DMQ5 153 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 FOLR1P15328 257 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 LOXP28300 417 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 DEFB134Q4QY38 66 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 XAF1Q6GPH4 301 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 GFRALQ6UXV0 394 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 OR10AD1Q8NGE0 317 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 MPLKIPQ8TAP9 179 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 MYOZ3Q8TDC0 251 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 SARAFQ96BY9 339 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 C1QTNF4Q9BXJ3 329 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 PARLQ9H300 379 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 CUL9Q8IWT3 2517 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 BPTFQ12830 3046 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 TRAV39A0A0B4J263 110 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 A0A1W2PP11 408 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 DNAL4O96015 105 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 IFITM1P13164 125 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 POLR2HP52434 150 aaKnown RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 TFF2Q03403 129 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 DEFB133Q30KQ1 61 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 Q75L30 129 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 MKXQ8IYA7 352 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 OR10D4PQ8NGN7 298 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 GPX7Q96SL4 187 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 WFDC1Q9HC57 220 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF835Q9Y2P0 537 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 SCN2AQ99250 2005 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 A0A087WW49 117 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 IGLV3-32A0A0A0MS00 114 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 EPPINO95925 133 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 AVPP01185 164 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 ICAM4Q14773 271 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 C1orf100Q5SVJ3 147 aa3.14□□□□□ -1.91
NEDD4-209ENST00000508871 MDC1Q14676 2089 aaKnown RBP3.14□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV5-51A0A0C4DH38 117 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BKO60814 126 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 IGKV3-11P04433 115 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H2BJP06899 126 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 CXCL1P09341 107 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 PRB4P10163 310 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 SLC25A45Q8N413 288 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 OR4C16Q8NGL9 310 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF431Q8TF32 576 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 MBD6Q96DN6 1003 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 LYZL4Q96KX0 146 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 IFI27L2Q9H2X8 130 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 NAA60Q9H7X0 242 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 SMCO4Q9NRQ5 59 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 SPRR3Q9UBC9 169 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV2-26A0A0B4J1V2 119 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms