RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 IGLC1P0CG04 106 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 OR10J1P30954 320 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 RAB11AP62491 216 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 TIGITQ495A1 244 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 DEFB125Q8N687 156 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 RNF2Q99496 336 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 SRD5A3Q9H8P0 318 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 BATF3Q9NR55 127 aa12.71□□□□□ -0.37
CLDND1-219ENST00000508659 PAIP2BQ9ULR5 123 aaKnown RBP12.71□□□□□ -0.37
CLDND1-219ENST00000508659 TRAV6A0A075B6T7 132 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 OR4C46A6NHA9 309 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 SYNGR2O43760 224 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 IGKV1-17P01599 117 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 RPP30P78346 268 aaKnown RBP12.7□□□□□ -0.38
CLDND1-219ENST00000508659 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 METTL26Q96S19 204 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 MAGT1Q9H0U3 335 aa12.7□□□□□ -0.38
CLDND1-219ENST00000508659 FAM240BA0A1B0GVZ2 78 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 MPTX1A8MV57 137 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 WRBO00258 174 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 MZT2BQ6NZ67 158 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 MITD1Q8WV92 249 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 ST8SIA2Q92186 375 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 NPIPB3Q92617 1050 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
CLDND1-219ENST00000508659 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 TMEM231Q9H6L2 316 aa12.69□□□□□ -0.38
CLDND1-219ENST00000508659 CD5P06127 495 aa12.68□□□□□ -0.38
CLDND1-219ENST00000508659 ASAH1Q13510 395 aa12.68□□□□□ -0.38
CLDND1-219ENST00000508659 Q8WTZ3 238 aa12.68□□□□□ -0.38
CLDND1-219ENST00000508659 WWC2-AS2Q96NR7 200 aa12.68□□□□□ -0.38
CLDND1-219ENST00000508659 SPATA25Q9BR10 227 aa12.68□□□□□ -0.38
CLDND1-219ENST00000508659 TM2D3Q9BRN9 247 aa12.68□□□□□ -0.38
CLDND1-219ENST00000508659 TBC1D24Q9ULP9 559 aa12.68□□□□□ -0.38
CLDND1-219ENST00000508659 COL7A1Q02388 2944 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 HUWE1Q7Z6Z7 4374 aaKnown RBP12.67□□□□□ -0.38
CLDND1-219ENST00000508659 IGKV3-7A0A075B6H7 116 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 H3BP45 60 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 UPK1BO75841 260 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 NPPCP23582 126 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 NKX2-1P43699 371 aaPredicted RBP12.67□□□□□ -0.38
CLDND1-219ENST00000508659 YPEL3P61236 119 aaPredicted RBP12.67□□□□□ -0.38
CLDND1-219ENST00000508659 HAGHQ16775 308 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 OR4D5Q8NGN0 318 aa12.67□□□□□ -0.38
CLDND1-219ENST00000508659 A0A1W2PS18 150 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 ZFP92A6NM28 416 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 SSSCA1O60232 199 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 SCGB1D2O95969 90 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 IL4P05112 153 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 H2AFB2P0C5Z0 115 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 GPX4P36969 197 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-219ENST00000508659 TFPI2P48307 235 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLDND1-219ENST00000508659 IAH1Q2TAA2 248 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-219ENST00000508659 SPANXN5Q5MJ07 72 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 TCF24Q7RTU0 167 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 ENKURQ8TC29 256 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 VSIRQ9H7M9 311 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 UBQLN2Q9UHD9 624 aa12.66□□□□□ -0.38
CLDND1-219ENST00000508659 TOMM40O96008 361 aa12.65□□□□□ -0.38
CLDND1-219ENST00000508659 APOHP02749 345 aaPredicted RBP12.65□□□□□ -0.38
CLDND1-219ENST00000508659 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
CLDND1-219ENST00000508659 PAFAH1B2P68402 229 aa12.65□□□□□ -0.38
CLDND1-219ENST00000508659 ODF3L2Q3SX64 289 aa12.65□□□□□ -0.38
CLDND1-219ENST00000508659 ZNF431Q8TF32 576 aaPredicted RBP12.65□□□□□ -0.38
CLDND1-219ENST00000508659 GRAMD2BQ96HH9 432 aa12.65□□□□□ -0.38
CLDND1-219ENST00000508659 SEC22CQ9BRL7 303 aa12.65□□□□□ -0.38
CLDND1-219ENST00000508659 STRAPQ9Y3F4 350 aaKnown RBP12.65□□□□□ -0.38
CLDND1-219ENST00000508659 RBMY1BA6NDE4 496 aaKnown RBP12.64□□□□□ -0.39
CLDND1-219ENST00000508659 RBMY1EA6NEQ0 496 aaKnown RBP12.64□□□□□ -0.39
CLDND1-219ENST00000508659 DFFBO76075 338 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 FABP1P07148 127 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 HNRNPCP07910 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLDND1-219ENST00000508659 RBMY1DP0C7P1 496 aaKnown RBP12.64□□□□□ -0.39
CLDND1-219ENST00000508659 RD3LP0DJH9 198 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 CRYBB3P26998 211 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 ID3Q02535 119 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 GAMTQ14353 236 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 GGTLC1Q9BX51 225 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 GSKIPQ9P0R6 139 aa12.64□□□□□ -0.39
CLDND1-219ENST00000508659 LOC102724200A0A096LPH7 203 aaPredicted RBP12.63□□□□□ -0.39
CLDND1-219ENST00000508659 CCSO14618 274 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 P2RY1P47900 373 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 USF2Q15853 346 aaPredicted RBP12.63□□□□□ -0.39
CLDND1-219ENST00000508659 FAM90A2PQ658T7 463 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 LINC00322Q6ZN03 302 aaPredicted RBP12.63□□□□□ -0.39
CLDND1-219ENST00000508659 GBGT1Q8N5D6 347 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 ZBTB8BQ8NAP8 495 aaPredicted RBP12.63□□□□□ -0.39
CLDND1-219ENST00000508659 OR51G1Q8NGK1 321 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 RNF125Q96EQ8 232 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 FAM110AQ9BQ89 295 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 PSENENQ9NZ42 101 aa12.63□□□□□ -0.39
CLDND1-219ENST00000508659 FAM25EA8MYX2 175 aa12.62□□□□□ -0.39
CLDND1-219ENST00000508659 DNASE2O00115 360 aaPredicted RBP12.62□□□□□ -0.39
CLDND1-219ENST00000508659 PSG1P11464 419 aa12.62□□□□□ -0.39
CLDND1-219ENST00000508659 EIF2B2P49770 351 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms