RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 GIG44P09565 113 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 DHODHQ02127 395 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 TMEM187Q14656 261 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 SLC24A4Q8NFF2 622 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 STXBP6Q8NFX7 210 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 OR51S1Q8NGJ8 323 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 DYNC2LI1Q8TCX1 351 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 TMEM230Q96A57 120 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 GRAMD2BQ96HH9 432 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 DIRAS2Q96HU8 199 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 PRRT1Q99946 306 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 HEYLQ9NQ87 328 aaPredicted RBP9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 U3KQE9 123 aa9.49□□□□□ -0.89
HMGCS1-205ENST00000508319 TRAV30A0A087WSZ9 112 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 ANKRD20A5PA0PJZ0 165 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 DEFB4AO15263 64 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 OR10J1P30954 320 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 RND2P52198 227 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 IL18Q14116 193 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 TRPT1Q86TN4 253 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 STHQ8IWL8 128 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 Q8NAQ8 132 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 OR1S2Q8NGQ3 325 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 RNASEH2CQ8TDP1 164 aaKnown RBP9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 RAB2BQ8WUD1 216 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 GLMPQ8WWB7 406 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 PRR13Q9NZ81 148 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 RABL2AQ9UBK7 228 aaPredicted RBP9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 RABL2BQ9UNT1 228 aa9.48□□□□□ -0.89
HMGCS1-205ENST00000508319 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 CEBPZOSA8MTT3 80 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 GSTZ1O43708 216 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 NXPH3O95157 252 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 SLC25A4P12235 298 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 C4BPBP20851 252 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 YPEL3P61236 119 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 USF2Q15853 346 aaPredicted RBP9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 NMSQ5H8A3 153 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 RPP25LQ8N5L8 163 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 IL22RA2Q969J5 263 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 NARS2Q96I59 477 aaKnown RBP9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
HMGCS1-205ENST00000508319 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 HNRNPCP07910 306 aaKnown RBP eCLIP9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 SULT1A3P0DMM9 295 aa9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 SULT1A4P0DMN0 295 aa9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 NPY1RP25929 384 aa9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 TMBIM6P55061 237 aa9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 SUPT4H1P63272 117 aaKnown RBP9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 LGALS9CQ6DKI2 356 aa9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 BCL7BQ9BQE9 202 aa9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 SLIRPQ9GZT3 109 aaKnown RBP9.46□□□□□ -0.9
HMGCS1-205ENST00000508319 HECTD4Q9Y4D8 3996 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 HELTA6NFD8 242 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 DEDDO75618 318 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 IL4P05112 153 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 SPP1P10451 314 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 DHRS2Q13268 280 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 TMEM41BQ5BJD5 291 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 C16orf54Q6UWD8 224 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 Q8WTZ3 238 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 SOSTQ9BQB4 213 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 HSPB7Q9UBY9 170 aa9.45□□□□□ -0.9
HMGCS1-205ENST00000508319 A0A0B4J2A0 478 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 IGHV4-28A0A0C4DH34 117 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 ZNF705EA8MWA4 302 aaPredicted RBP9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 H3BMQ9 156 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 TOMM40O96008 361 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 RBMY1A1P0DJD3 496 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 RBMY1CP0DJD4 496 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 EIF2B2P49770 351 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 RBMY1FQ15415 496 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 LYZL2Q7Z4W2 148 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 DTD1Q8TEA8 209 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 NPIPB3Q92617 1050 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 ACY3Q96HD9 319 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 HRH4Q9H3N8 390 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 MCUBQ9NWR8 336 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 CACFD1Q9UGQ2 172 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 RSL24D1Q9UHA3 163 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 SHPKQ9UHJ6 478 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 SCP2D1Q9UJQ7 156 aa9.44□□□□□ -0.9
HMGCS1-205ENST00000508319 FAM90A26D6RGX4 464 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 BUB3O43684 328 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 IFNA10P01566 189 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 IFNA4P05014 189 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 MIFP14174 115 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 AKR1C4P17516 323 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 CCR6P51684 374 aa9.43□□□□□ -0.9
HMGCS1-205ENST00000508319 SMCO1Q147U7 214 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms