RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 RAB11AP62491 216 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 DHRS2Q13268 280 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 ASAH1Q13510 395 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 DEFB114Q30KQ6 69 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 SPINK9Q5DT21 86 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 LAMTOR1Q6IAA8 161 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 ZNF600Q6ZNG1 722 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 S4R3C0 116 aa6.92□□□□□ -1.3
UBE2D3-223ENST00000508249 IGHV3-21A0A0B4J1V1 117 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 DEDDO75618 318 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 UPK1BO75841 260 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 IFNA10P01566 189 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 ADMP35318 185 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 DEFA1P59665 94 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 DEFA3P59666 94 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 CD300EQ496F6 205 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 GGNBP1Q5YKI7 109 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 UXS1Q8NBZ7 420 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 TMEM116Q8NCL8 245 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 OR1S2Q8NGQ3 325 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 MITD1Q8WV92 249 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 CACNG8Q8WXS5 425 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 OR10C1Q96KK4 312 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 CHRDL1Q9BU40 450 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 RBKSQ9H477 322 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 TMEM231Q9H6L2 316 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
UBE2D3-223ENST00000508249 A0A1W2PS18 150 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 WRBO00258 174 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 SYNGR2O43760 224 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 TMEM50AO95807 157 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 FABP1P07148 127 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 HOXB5P09067 269 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 ANXA7P20073 488 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 GPX4P36969 197 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 UNQ9165/PRO28630Q6UXU0 137 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 RBPMS2Q6ZRY4 209 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 SLC16A13Q7RTY0 426 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 ENKURQ8TC29 256 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 NARS2Q96I59 477 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 SLC35E1Q96K37 410 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 SPAG8Q99932 426 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 FNDC4Q9H6D8 234 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 FLVCR2Q9UPI3 526 aa6.9□□□□□ -1.3
UBE2D3-223ENST00000508249 TRAV14DV4A0A0A6YYC5 116 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 TSPAN4O14817 238 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 PRAF2O60831 178 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 YIF1AO95070 293 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 SCAF4O95104 1147 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 IFNA4P05014 189 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 IL5P05113 134 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 H2AFB2P0C5Z0 115 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 NUP62P37198 522 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 NKX2-1P43699 371 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 CMC4P56277 68 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 YPEL3P61236 119 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 EWSR1Q01844 656 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■■■■■ 34.3
UBE2D3-223ENST00000508249 ID3Q02535 119 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 TM4SF20Q53R12 229 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 PRSS54Q6PEW0 395 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 IL17DQ8TAD2 202 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 ZNF431Q8TF32 576 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 C20orf24Q9BUV8 137 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 NUDT15Q9NV35 164 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 PFDN2Q9UHV9 154 aa6.89□□□□□ -1.31
UBE2D3-223ENST00000508249 IGHV3-35A0A0C4DH35 117 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 IGHV7-4-1A0A0J9YVY3 117 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 OR4C46A6NHA9 309 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 CFDP00746 253 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 OR10J1P30954 320 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 S100A7P31151 101 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 RND2P52198 227 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 TAS2R30P59541 319 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 GUCA2BQ16661 112 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 TOMM20LQ6UXN7 152 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 TMEM61Q8N0U2 210 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 OR4D5Q8NGN0 318 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 Q8WTZ3 238 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 METTL26Q96S19 204 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 RAB40CQ96S21 281 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 TUBA4BQ9H853 241 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 GPN1Q9HCN4 374 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 MLXQ9UH92 298 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 SMPXQ9UHP9 88 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 TBC1D24Q9ULP9 559 aa6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 STRAPQ9Y3F4 350 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 PUS1Q9Y606 427 aaKnown RBP eCLIP6.88□□□□□ -1.31
UBE2D3-223ENST00000508249 TRAV6A0A075B6T7 132 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 TRAV2A0A0B4J234 112 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 ZNF785A8K8V0 405 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 ADAP1O75689 374 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 NXPH3O95157 252 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 IGLC1P0CG04 106 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 IAPPP10997 89 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 EIF2B2P49770 351 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 CD81P60033 236 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 PAFAH1B2P68402 229 aa6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 IAH1Q2TAA2 248 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-223ENST00000508249 C12orf45Q8N5I9 185 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms