RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 USF2Q15853 346 aaPredicted RBP11.77□□□□□ -0.53
HOXC4-203ENST00000507650 DCANP1Q8TF63 244 aa11.77□□□□□ -0.53
HOXC4-203ENST00000507650 LINC00476Q8WZB0 136 aa11.77□□□□□ -0.53
HOXC4-203ENST00000507650 IL22RA2Q969J5 263 aa11.77□□□□□ -0.53
HOXC4-203ENST00000507650 RBM38Q9H0Z9 239 aaKnown RBP11.77□□□□□ -0.53
HOXC4-203ENST00000507650 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.53
HOXC4-203ENST00000507650 TRAV2A0A0B4J234 112 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 SULT1A3P0DMM9 295 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 SULT1A4P0DMN0 295 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 AKR1C4P17516 323 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 NPPCP23582 126 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 RNASEH2CQ8TDP1 164 aaKnown RBP11.76□□□□□ -0.53
HOXC4-203ENST00000507650 GLMPQ8WWB7 406 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 RBKSQ9H477 322 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 MCUBQ9NWR8 336 aa11.76□□□□□ -0.53
HOXC4-203ENST00000507650 CXorf65A6NEN9 183 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 MPTX1A8MV57 137 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
HOXC4-203ENST00000507650 NPY1RP25929 384 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 OR10J1P30954 320 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 STXBP6Q8NFX7 210 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 OR1S2Q8NGQ3 325 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 NPIPB3Q92617 1050 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 METTL26Q96S19 204 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 RABAC1Q9UI14 185 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 SCP2D1Q9UJQ7 156 aa11.75□□□□□ -0.53
HOXC4-203ENST00000507650 A0A0B4J2A0 478 aa11.74□□□□□ -0.53
HOXC4-203ENST00000507650 DNASE2O00115 360 aaPredicted RBP11.74□□□□□ -0.53
HOXC4-203ENST00000507650 PITX3O75364 302 aa11.74□□□□□ -0.53
HOXC4-203ENST00000507650 CD5P06127 495 aa11.74□□□□□ -0.53
HOXC4-203ENST00000507650 C4BPBP20851 252 aa11.74□□□□□ -0.53
HOXC4-203ENST00000507650 YPEL3P61236 119 aaPredicted RBP11.74□□□□□ -0.53
HOXC4-203ENST00000507650 RPL11P62913 178 aaKnown RBP11.74□□□□□ -0.53
HOXC4-203ENST00000507650 SMCO1Q147U7 214 aa11.74□□□□□ -0.53
HOXC4-203ENST00000507650 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
HOXC4-203ENST00000507650 C16orf54Q6UWD8 224 aa11.74□□□□□ -0.53
HOXC4-203ENST00000507650 TRPT1Q86TN4 253 aaKnown RBP11.74□□□□□ -0.53
HOXC4-203ENST00000507650 SHPKQ9UHJ6 478 aa11.74□□□□□ -0.53
HOXC4-203ENST00000507650 IGKV1D-37A0A075B6S9 117 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 RPS10-NUDT3A0A1W2PQS6 291 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 DEFB4AO15263 64 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
HOXC4-203ENST00000507650 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 SLC25A4P12235 298 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 CCR6P51684 374 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
HOXC4-203ENST00000507650 PAFAH1B2P68402 229 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 CCDC190Q86UF4 302 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 OR11H2Q8NH07 326 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 GATAD1Q8WUU5 269 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 ACY3Q96HD9 319 aa11.73□□□□□ -0.53
HOXC4-203ENST00000507650 DNAH10Q8IVF4 4471 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 TRAV30A0A087WSZ9 112 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 NUPR2A6NF83 97 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 GSG1LQ6UXU4 331 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 GRAMD2BQ96HH9 432 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 RARRES2Q99969 163 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 TMEM231Q9H6L2 316 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 KCNIP3Q9Y2W7 256 aa11.72□□□□□ -0.53
HOXC4-203ENST00000507650 A0A1W2PS18 150 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 NOL3O60936 208 aaKnown RBP11.71□□□□□ -0.53
HOXC4-203ENST00000507650 TOMM40O96008 361 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 IL4P05112 153 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 HNRNPCP07910 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
HOXC4-203ENST00000507650 PSG1P11464 419 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.53
HOXC4-203ENST00000507650 PYDC2Q56P42 97 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 LGI3Q8N145 548 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 Q8NAQ8 132 aa11.71□□□□□ -0.53
HOXC4-203ENST00000507650 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.53
HOXC4-203ENST00000507650 DNAH6Q9C0G6 4158 aa11.7□□□□□ -0.54
HOXC4-203ENST00000507650 IFNA10P01566 189 aa11.7□□□□□ -0.54
HOXC4-203ENST00000507650 ZNF90Q03938 601 aa11.7□□□□□ -0.54
HOXC4-203ENST00000507650 GAMTQ14353 236 aa11.7□□□□□ -0.54
HOXC4-203ENST00000507650 Q8WTZ3 238 aa11.7□□□□□ -0.54
HOXC4-203ENST00000507650 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
HOXC4-203ENST00000507650 SCGB3A2Q96PL1 93 aa11.7□□□□□ -0.54
HOXC4-203ENST00000507650 IGKV1OR2-108A0A075B7D4 117 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 BUB3O43684 328 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
HOXC4-203ENST00000507650 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
HOXC4-203ENST00000507650 TMEM128Q5BJH2 165 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 TOMM5Q8N4H5 51 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 LRTM2Q8N967 370 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 CSNK1G2-AS1Q8NCQ2 148 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 OR51G1Q8NGK1 321 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 U3KQ87 197 aa11.69□□□□□ -0.54
HOXC4-203ENST00000507650 FAM90A26D6RGX4 464 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 PRSS46E5RG02 174 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 LY6G6CO95867 125 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 RD3LP0DJH9 198 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 IAPPP10997 89 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 DEFB1P60022 68 aa11.68□□□□□ -0.54
HOXC4-203ENST00000507650 DHRS2Q13268 280 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms